Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq14 143 4e-29 >seq14 Length=25249 Score = 143 bits (158), Expect = 4e-29 Identities = 437/670 (65%), Gaps = 4/670 (1%) Strand=Plus/Minus Query 66027 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 66086 || ||||||| |||||| || |||| | || || || ||| || | ||||||||| Sbjct 6905 GGGCACATCAGCGACCAGTCGCCGTTCTGCTCGACGCGGCGCATGAACAAGTCAGGAATC 6846 Query 66087 CAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 66146 || || || | || | || | | | ||||| || || || || ||| Sbjct 6845 CACAGCGCCAGGAACAGGTCGCGCGCGCGCACCTCCTCCTTACCGTGGTTTTTGCGCAGA 6786 Query 66147 TCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 66206 || | |||| | | | || | |||||||| |||| ||| ||||| | | || || Sbjct 6785 TCAATGAACTCGAACACGTCCGAGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGA 6726 Query 66207 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 66266 || ||||| || ||||| || | ||| | || ||||| || || || | | ||| || Sbjct 6725 CGCTTGTTGCCACCCTGGTCCACGTAGCGCGCTGTGTTGTTGTATACGCGGAGCATGGGC 6666 Query 66267 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTA 66326 | |||||| ||| ||||| || |||| || || || ||||||| || || Sbjct 6665 ACAATACCGTTGCTCACGCCATTCGTACCGGCAATGTACGAGCCCGTTGCACGGATGTTG 6606 Query 66327 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGT 66385 || ||||| || || || ||| | || ||| | ||||| ||| || | ||| Sbjct 6605 TGGATATTCAGACCAATACCACCGGCCGTCTTGCTGATCATCGCGCA-CGTCTTGAGCGT 6547 Query 66386 ATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG 66445 || ||||| ||||| ||| || ||| ||||| | | || || ||| |||||||| Sbjct 6546 GTCGTAGATACCCTCGATAGAGTCGTCCTTCATGCTCACAAGGAAGCAGGACGACATTTG 6487 Query 66446 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 66505 | | || || ||||| || | ||| || || ||||| ||||| || || || Sbjct 6486 GGGGTTGGGCGTGCCAGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTCGGA 6427 Query 66506 AA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGA 66564 | |||| ||||| |||||||| || | | |||| || || || || |||| Sbjct 6426 CATGTAG-TTGTATGTCTCAATGGCGCTCTTCACATCCTCGCCGTGGATGCCCACAGCGA 6368 Query 66565 CACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGG 66624 ||||||| | ||||||||| || | || ||| |||| || || || || ||||| Sbjct 6367 CACGCATGAGCATGTGCTGGGGGCGCTCCGCGACCTTGCCATTGATGCGCAGCAGGTAGG 6308 Query 66625 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAA 66684 | |||| || || || || ||| ||||||| |||||| || |||||||| | Sbjct 6307 AGCGCTCCAGCGTCTTGAAGCCGAAAAAGTTGTAGTGAAAGTCGCGCTCGTAAATGACCG 6248 Query 66685 CCGAGTTGAG 66694 |||||| ||| Sbjct 6247 CCGAGTCGAG 6238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658170915980360