Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq199 96.9 2e-15 >seq199 Length=10002 Score = 96.9 bits (106), Expect = 2e-15 Identities = 115/151 (76%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 33571 CCAGAGATGGGCGACAAGTTTGCATCG-TTCACGGCCCAGAAGGGCACGTGCGGCATGA- 33628 || ||| ||||||||||||| | ||| ||||| |||||||||| ||| ||| ||| Sbjct 5934 CCCGAGCTGGGCGACAAGTTCTCCTCGCGCCACGG-CCAGAAGGGCGTGTGTGGCCTGAT 5992 Query 33629 TGTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCA 33688 ||| | |||| ||||||||||||||||| ||| ||| | ||| ||| | | || | Sbjct 5993 TGTGC-CCCAGGAGGACATGCCGTTCACGGACGATGGCATCCACCCTGACATCATTATGA 6051 Query 33689 ACCCGCATGCGTTCCCCTCGCGCATGACGGT 33719 |||| || | ||||| |||||||||||||| Sbjct 6052 ACCCCCACGGCTTCCCGTCGCGCATGACGGT 6082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356232605774287