Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq8 143 3e-29 seq105 86.0 6e-12 >seq8 Length=40485 Score = 143 bits (158), Expect = 3e-29 Identities = 166/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 |||||||| | |||||| | || ||||| || ||||| | ||||| || || | ||| Sbjct 5298 GAGGCCGTGGCCATTGAGCAGGACTTTTTGACCGACGCCCTGCCCGTCTCGCTGATCGGC 5357 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 ||||||||| | | |||||| ||||||| |||||||| || ||| | ||| || | | Sbjct 5358 ATGAACGCGCGCCTCATGTGCCAGTACATTGAGTTTGTGGCCGACCGCCTGCTGGTCAAC 5417 Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016 ||||| | || || |||| || || ||||||||| |||||| | ||||| ||| Sbjct 5418 CTCGGCAACCCCAAGCACTACAACTCGGCGAACCCCTTTGACTTTATGGAGAACATTTCG 5477 Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTA 53060 ||| ||||||| | |||||||||||| | || |||| ||| || Sbjct 5478 CTCCAGGGCAAGTCGAACTTTTTCGAGCGCCGCGTGGCCGACTA 5521 >seq105 Length=229645 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 |||| || | ||| | ||| ||| || || ||||| || ||||||| |||| Sbjct 227300 CGCAGCACGAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCA 227241 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || || ||||| || || || ||||||| || || || || || || || || || ||| Sbjct 227240 TCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTG 227181 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | ||||||| | ||||||||||| ||| | | Sbjct 227180 TCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATC 227121 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| ||||||| || || ||||| | |||||| Sbjct 227120 GTCTTCCCGGTCAGGGTCTTGACGAACACTTGCAT 227086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496062580016800