Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq102 82.4 5e-11 >seq102 Length=51898 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTC 43971 ||| | ||| ||||||||||| || || || || || ||| | | ||| |||| || Sbjct 9006 CACGAGATGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTC 8947 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031 || || || || ||||| |||| || || |||||| |||| | ||| || || || Sbjct 8946 CAGCTGCTTACCAGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 8887 Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091 ||| || ||||| | | | || || | || ||||| |||| ||||| || || Sbjct 8886 AATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGATTCCACCTCGAGGGTAATCGTCTT 8827 Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || | ||||| ||||| |||||||| Sbjct 8826 GCCAGTGAGGGTCTTTACAAAAATTTGCAT 8797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354776609837892