Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq102 113 1e-19 >seq102 Length=51898 Score = 113 bits (124), Expect = 1e-19 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| || || ||||| ||||| | || || || || || || |||||||| Sbjct 8987 TCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCCAGCTGCTTACCAGCAAAG 8928 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | |||||| || ||||| || || || || ||||||||||| || || || || Sbjct 8927 ATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTG 8868 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | || || | ||| ||||| || ||||| ||||| ||||| || || |||||| Sbjct 8867 TCGATCGTGTCCGACGATTCCACCTCGAGGGTAATCGTCTTGCCAGTGAGGGTCTTTACA 8808 Query 104549 AATATCTGCATTTTG 104563 || || |||||| || Sbjct 8807 AAAATTTGCATTGTG 8793 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | ||| || ||||| || || ||||| ||||| | || || Sbjct 9236 AGCACGAGATGCAGCGTACTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCC 9177 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || |||||||| || || | |||||| || ||||| || || || || ||| Sbjct 9176 TCCAGCTGCTTACCAGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 9117 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| || || ||||| || | || || | ||| ||||| || | ||| ||| Sbjct 9116 TGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGATTCCACCTCGAGGGGAATCGTC 9057 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || || || || |||||||| Sbjct 9056 TTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 9025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151395021725132