Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq8 102 8e-17 >seq8 Length=40485 Score = 102 bits (112), Expect = 8e-17 Identities = 157/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 119646 TACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCATA 119705 || ||| |||| || || ||||| || | |||||||| || || ||||| | |||| Sbjct 5521 TAGTCGGCCACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGGAGCGAAATGTTCTCCATA 5462 Query 119706 AACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCGA 119765 || || || || || || | |||| | |||||| || ||| | | || || ||| || Sbjct 5461 AAGTCAAAGGGGTTCGCCGAGTTGTAGTGCTTGGGGTTGCCGAGGTTGACCAGCAGGCGG 5402 Query 119766 TCTGCCACAAACTCGATGTATTCGCACATGGATTGCGAATTCATGCCCAACATAGCGACC 119825 || ||||||||||| ||||| | ||||||| ||| |||||||| | || | ||| Sbjct 5401 TCGGCCACAAACTCAATGTACTGGCACATGAGGCGCGCGTTCATGCCGATCAGCGAGACG 5342 Query 119826 GGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 || | || | ||| || || |||| |||||| | || || || Sbjct 5341 GGCAGGGCGTCGGTCAAAAAGTCCTGCTCAATGGCCACGGCCTC 5298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478661029828880