Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq14 291 2e-73 >seq14 Length=25249 Score = 291 bits (322), Expect = 2e-73 Identities = 640/946 (68%), Gaps = 36/946 (4%) Strand=Plus/Plus Query 363389 TTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTG 363448 ||||||| | |||||| ||||| |||||||| || |||||||| | | | | Sbjct 6281 TTTTCGGCTTCAAGACGCTGGAGCGCTCCTACCTGCTGCGCATCAATGGCAAGGTCGCGG 6340 Query 363449 AACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATG 363508 | ||||| ||||| ||| | |||||||| ||| | || ||||| || |||||| | Sbjct 6341 AGCGCCCCCAGCACATGCTCATGCGTGTCGCTGTGGGCATCCACGGCGAGGATGTGAAGA 6400 Query 363509 CCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA----TTCACGCACGCCACGCCA 363564 ||| ||||| ||||| || ||| || || | | || || ||||| |||| Sbjct 6401 GCGCCATTGAGACATACAA----CTACATGTCCGAGAAGGCCTTTACACACGCGTCGCCG 6456 Query 363565 ACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATG 363624 || ||| ||||||||| || | || || || ||||| || ||||| ||| | | ||| Sbjct 6457 ACCCTGTTCAATGCTGGCACGCCCAACCCCCAAATGTCGTCCTGCTTCCTTGTGAGCATG 6516 Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684 |||||||| || ||||||||||||| ||||| || |||| || || | || |||| Sbjct 6517 AAGGACGACTCTATCGAGGGTATCTACGACACGCTCAAGACGTGCGCGATGATCAGCAAG 6576 Query 363685 AATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGC 363744 | || || || |||||| | |||||||| | |||||| | | |||||| | Sbjct 6577 ACGGCCGGTGGTATTGGTCTGAATATCCACAACATCCGTGCAACGGGCTCGTACATTGCC 6636 Query 363745 GGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803 || || | || | | || || | || |||||||| || || | |||| || || Sbjct 6637 GGTACGAATGGCGTGAGC-AACGGTATTGTGCCCATGCTCCGCGTATACAACAACACAGC 6695 Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863 | | ||||| ||||||||||| ||||| || || ||||| || || || ||||| Sbjct 6696 GCGCTACGTGGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTTGCCATCTACCTGGAGCC 6755 Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923 || | || | || ||||| |||| || || |||||| || || ||||| | Sbjct 6756 GTGGCACTCGGACGTGTTCGAGTTCATTGATCTGCGCAAAAACCACGGTAAGGAGGAGGT 6815 Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983 ||| || || || |||||| || || ||| || ||||| || ||| ||||| || Sbjct 6816 GCGCGCGCGCGACCTGTTCCTGGCGCTGTGGATTCCTGACTTGTTCATGCGCCGCGTCGA 6875 Query 363984 GGCAGGTAAG-AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA-TG-T 364040 |||| | | ||||| || | ||||| ||| || || || || |||| || | Sbjct 6876 -GCAGAACGGCGACTGGTCGCTGATGTGCCCCGCCGAGTGCCCCGGCCTGGCCGACTGCT 6934 Query 364041 ATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGG-------AAAGG 364093 || || || || | || |||||| ||||| || || || ||||| || | Sbjct 6935 AT--GGCGAAGAATTTGATGCTCTCTACGAGAAATACGAGCGCGAGGGCCGCGCCAAGCG 6992 Query 364094 CTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGA 364153 ||| | ||| || |||||||| |||| |||||| | || | ||||| |||| Sbjct 6993 CTC---TGTCAA----GGCGCAGAAGCTGTGGTATGCCATTCTCGAGGCACAGATCGAGA 7045 Query 364154 CAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACC 364213 | || | |||| | ||||||| || ||| ||||||||| ||||||| || ||| Sbjct 7046 CGGGCAACCCCTTCGTCCTGTACAAGGACTCGGCGAACCGCAAGAGCAACCAGAAGAACC 7105 Query 364214 TTGGTACAATTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATACACCGCTCCCG 364270 | || || | ||| ||||| ||||| || || |||||||| || |||| | | || | Sbjct 7106 TGGGCACGA-TCA--AGAGCTCGAACCTGTGCACGGAGATTATCGAGTACAGCTCGCCGG 7162 Query 364271 ACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTT 364316 ||||||| || || || ||||| |||||||| ||||| ||| |||| Sbjct 7163 ACGAGACGGCTGTGTGCAACCTGGCGTCGATTGCGCTGCCGACGTT 7208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303349775879078