Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq8 223 6e-53 seq102 143 5e-29 seq105 140 6e-28 seq53 127 4e-24 seq27 125 1e-23 seq87 91.5 3e-13 >seq8 Length=40485 Score = 223 bits (246), Expect = 6e-53 Identities = 580/868 (67%), Gaps = 31/868 (4%) Strand=Plus/Minus Query 9963 ACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGGGAAATGAGCTCCATGAAGTCAAAG 10022 || ||||||||||| ||||| |||||||||| ||| |||||| |||||| ||||||||| Sbjct 5512 ACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGGAGCGAAATGTTCTCCATAAAGTCAAAG 5453 Query 10023 GGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGTGCTG-TGAAAATGCGGTCAGCCAC 10081 |||||| | | | | |||||||||| ||||| | || | | |||||| ||||| Sbjct 5452 GGGTTCGCCGAGTTGTAGTGCTTGGGGTTGCCGAG-GTTGACCAGCAGGCGGTCGGCCAC 5394 Query 10082 GAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATGCCAATCATGCG-GCAGGGGATGG 10140 ||||| |||||||||| ||| ||| || ||||||||| |||| ||| | ||| | || Sbjct 5393 AAACTCAATGTACTGGCACATGAGGCGCGCGTTCATGCCGATCA-GCGAGACGGGCAGGG 5335 Query 10141 CGTCG--CAAATGAAGTCCTTTTCGTTGGCGACCGCTTCCTCGACGATGCTCTTTACCAC 10198 ||||| |||| ||||||| || |||| || || || || ||||| || ||| Sbjct 5334 CGTCGGTCAAA--AAGTCCTGCTCAATGGCCACGGCCTCGGTGATGATGCGGTTCACCGT 5277 Query 10199 GTCAAGG---GACAGCTTGTTCTCGAGCTTCGAATACAGGAGCTCTCCAAACTGCTGGTG 10255 ||| || | |||| ||| | | | || ||| ||| |||| | ||| Sbjct 5276 GTCGGGGTGCGCGCGCTTCTTCAGGTGGCT-GA--ACAAGAGGCAGGCAAAGTCGGTGTG 5220 Query 10256 GAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCCCCG 10315 || |||||||| || ||||| |||||| || || ||| || |||||||| || || Sbjct 5219 CAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCCAGGCATGAGACCGCG 5160 Query 10316 GTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGACCCTCCACGCACAC 10375 || ||||| || |||| | ||||| || ||||| | | ||||| ||| | Sbjct 5159 CTTCTTGAGCCAAAAGATGGAGGCAAACGAGCCCGAGAAAAAGATGCCCTCGACGGCGGC 5100 Query 10376 CCAGGCGACGAGGCGCTCTGCGA---AGGAGCGGTCGCGCGAAAAGTATTTCGAGGCCCA 10432 ||||||| |||||||| | || ||| ||| | | ||| | | | ||||||| Sbjct 5099 AAAGGCGACCAGGCGCTCCGAGAACGAGGCGCGCTTGTCCGAGATCCAGCGCAAGGCCCA 5040 Query 10433 CGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGATAGCCTCGAAGAGCTTGTTACGCTC 10492 | | ||||||| ||| ||||||| |||||||| || | ||||| | | |||| Sbjct 5039 CTCGGCCTTCTGCTTGACGACAGGGATGGTCTCGATGGCGTTAAAGAGGTATTCGCGCT- 4981 Query 10493 GGTCTCGTCCTCA---ATAAGAGCATCAAGGAGCAGGGAGTATTGCTCGCTGTGGACGCT 10549 ||| |||| || | |||| ||| || ||||| ||| ||||| | | Sbjct 4980 --GCTCCGACTCACGGATGTACGTGTCAATGAGGAGCGAGTACGTCTCCGAGTGGATGTT 4923 Query 10550 CT-CATTGTACCCCTGGTAAGCGTAGAACATACGTGCCGAGGGGTCCGTGACTTCCTCGG 10608 || ||| || ||| | ||||||| || ||| | | || || || || Sbjct 4922 CTCCATCATA-ATCTGAAAGCCGTAGAAGCAGCGGGCCTCAGCGGCCTGCACCTCGGCGC 4864 Query 10609 CAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGA 10668 ||| | ||||||||| | || ||||| || | | ||||||||| | |||| Sbjct 4863 TGAAGCGCTCCACCAGGTTCTCGTTGACGATGCCGTCTGAGGCAGCAAAGAAGGCCAGGA 4804 Query 10669 TGTGCTTGATGAAGTGGCGCTCATCATCGTTCA---GTTTTTCACGCCAGTCTACCACAT 10725 || | | ||||||||||||| ||||||| | | || |||||| || | Sbjct 4803 CATGGCTTACAAAGTGGCGCTCATTGTCGTTCATGCGGTGGTC---CCAGTCGTGCAGGT 4747 Query 10726 CCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCT 10785 ||| || | | |||||| |||||||||| | || |||||||||||||||||| Sbjct 4746 CCTTCGACAGGTCCATCTCCTCGGCGGTCCAGAACGACGCCTCGGCCTTCTTGTACATCT 4687 Query 10786 GGAAAATGTCGGGGTACCGGATGGGGAA 10813 | | || ||| |||| ||||| ||||| Sbjct 4686 GCCAGATCTCGTGGTAGCGGATCGGGAA 4659 >seq102 Length=51898 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||||| || | || ||||| ||| || |||||||| || ||| Sbjct 9251 CCACCACGCAGGCGCAGCACGAGATGCAGCGTACTCTCCTTCTGGATGTTGTAGTCGCTC 9192 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || || | |||||||| || ||| Sbjct 9191 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGTTGGTCCGGAGGA 9132 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| |||||||| || || ||||| | ||||| || Sbjct 9131 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGATTCCACC 9072 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || || || || || ||||||||||||||||| |||||||| Sbjct 9071 TCGAGGGGAATCGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 9025 Score = 141 bits (156), Expect = 2e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| || | || |||||| ||| || |||||||| || ||| Sbjct 9023 CCACCACGCAGACGCAGCACGAGATGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 8964 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || || | |||||||| || ||| Sbjct 8963 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGTTGGTCCGGAGGA 8904 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| |||||||| ||||||||| ||||| ||||| | ||||| || Sbjct 8903 ATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGATTCCACC 8844 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || | ||| || || || || ||||||||||| || || || |||||| || Sbjct 8843 TCGAGGGTAATCGTCTTGCCAGTGAGGGTCTTTACAAAAATTTGCATTGTG 8793 >seq105 Length=229645 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||||| || | ||| |||||| ||| || |||||||| || ||| Sbjct 227312 CCACCACGCAGGCGCAGCACGAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 227253 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | |||||||| || || Sbjct 227252 AGGGTGCGACCATCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGTTGGTCCGGGGGG 227193 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| ||||| || |||||| ||||| | || || || Sbjct 227192 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 227133 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || || || |||||||||||||| | ||||| Sbjct 227132 TCAAGGGTGATCGTCTTCCCGGTCAGGGTCTTGACGAACACTTGCAT 227086 >seq53 Length=44312 Score = 127 bits (140), Expect = 4e-24 Identities = 449/691 (65%), Gaps = 28/691 (4%) Strand=Plus/Plus Query 224956 CTCCAGGTCCTGGCCTGAGGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAG 225015 ||||||||||| || | || ||||| | ||||||| || ||| |||| || Sbjct 21820 CTCCAGGTCCTCACCGGTCTGGTAACGCCAGAGCATGTACTCCAGAGGAGTCTTGTCGAG 21879 Query 225016 GTGGTTCTCAATATGGTGGAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATG 225075 ||| | ||||| |||||||| || ||||| || ||||| | || || |||||| || Sbjct 21880 GTGCTGGTCAATGTGGTGGAACGCGTGCTGCGCCACGTAACCAATAACCAGGTTGGGGTG 21939 Query 225076 CTTCCACACAGAGC-CCCGAGT-CGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTA 225133 |||||||| | | ||||||| ||| | | || ||| | | ||| | ||||| Sbjct 21940 CTTCCACA--GCTCACCCGAGTTCGGCTCCGTGTCACCGACCACCAGCTTCACCAGCGTC 21997 Query 225134 GTCTTGCCCGCACCATTGGGGCCAATCACGCCAATCCGGGATGACATTGCAACCTGC--- 225190 | ||| |||| ||| |||||||| | ||| | | || || |||| | | |||| Sbjct 21998 GACTTACCCGAACCGTTGGGGCCCAGCACAGCCACACGCGACGACAGCGACAGCTGCATC 22057 Query 225191 GAGTT--CACGTTGCTGAAGATCTCAGG-GCCAGTTTGGTAAGCAAAGGCCACGCCACGC 225247 ||| | |||| |||| | | || ||| | |||| ||| | ||| ||||| Sbjct 22058 GAGATACCACGCAGCTGGGGCGCCGGGGTGCCGG---GGTACTGGAAGACGACGTCACGC 22114 Query 225248 AGCTTCATGATGGCACGGTCCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAAC 225307 | ||||| || | ||||||| | | ||| ||||| | | ||| | ||| | | Sbjct 22115 ATCTTCACGAGCGACTTCTCCTTGGTCTTGACACCGTCCAGCAGCGGGGGGTTGGGCAGC 22174 Query 225308 TCCCACTTGGTCACCGCGTCC---TTCAGGTCGTAGTAAGATGCAGCCTCGGGT---CGC 225361 | || | || | || ||||| ||| ||| | |||||| || ||| Sbjct 22175 TTGAACGAGTAGTCCTCACCCGAGTTCAGCTCGACGTAGGCACGAGCCTCCGGCACACGC 22234 Query 225362 TTTGCCACGAAAGCAGACAGGTTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAA 225421 || ||| || || |||||| ||| ||| | ||| ||||| | ||| || Sbjct 22235 TT---CACAAAGGCGTCCAGGTTACCGGGGTAACGCTTGATCTTGAAGCGGTTCAGGT-- 22289 Query 225422 TGAACAATTGCCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGAC 225481 | | ||| | | ||||| ||| ||||| |||||||| ||||||||||| || Sbjct 22290 -GCAGAATGTCGGTACACACGTCGTTCAGGAACTTGGAGTCGTGCGACACAATGATCGAG 22348 Query 225482 GACACGTTCGTCAGGCCCTTGAGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATG 225541 | |||| ||| || | | || |||||| ||| ||||||||| ||||||||| | Sbjct 22349 GTGGCGTTGGTCGTGCGCAGGTAGTCCGTGAT---CCAGGCCACGTTGATGACGTCCAAG 22405 Query 225542 TGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGA 225601 ||||| || || || || || ||||| ||||| || | | || | ||| || | || Sbjct 22406 TGGTTGGTCGGCTCATCGAGCAGCAGAATGTCGGCCTTGAACAGCACGGCACGGGCCAGG 22465 Query 225602 GACAGCTTCATTTTCCAGCCCCCGGACAGGG 225632 | |||||||| ||||| || || || |||| Sbjct 22466 GCGAGCTTCATCTTCCAACCACCCGAGAGGG 22496 Score = 93.3 bits (102), Expect = 8e-14 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 224507 AGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGC 224566 |||||||| ||||| | |||||| |||||||| ||||| | ||||| |||||| || Sbjct 21356 AGCGACTCACGGTCCAAGAAGTTGGTCGGCTCGTCCAGCACGATAATGTGGGGCATACGC 21415 Query 224567 CACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCGC 224626 || ||| ||||| | ||| | ||| ||||||||||| || ||||| || || || Sbjct 21416 CAGGTGGCAGCACCCAGCACGACCTTGACCTTCTGACCACCCGAGAGACCACGCATGGTG 21475 Query 224627 GAGTGAGTCGTGAATTCGGGGTCAAGACCAA 224657 ||| | ||||| ||| | || ||||||| Sbjct 21476 TTGTGCGAGGTGAACTCGCGCTCGAGACCAA 21506 Score = 87.8 bits (96), Expect = 3e-12 Identities = 131/184 (71%), Gaps = 8/184 (4%) Strand=Plus/Plus Query 225817 GGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCC 225876 |||||||||||| | |||||| || || || || | |||||| ||| || | || Sbjct 22675 GGGGAAGCCCTCGACCTGGCCGTTCTGGATGGCGCGCATCAGGGTCGACTTACCGGAACC 22734 Query 225877 GTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGC-GCGTGGA---GT 225932 ||| |||| ||| ||||| | | || ||||||| || || | |||| || Sbjct 22735 GTTACGACCACAGAGACCGTAGCGGTGGCCACGCTTGA----GACGCAGGGTGGCAGTGT 22790 Query 225933 TCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCT 225992 |||| || |||||| |||| ||||| || ||||||| || | ||||||||||| |||| Sbjct 22791 TCAGCAGAATCTTGGCACCGTAGGCCAGCGAGAACTGACAGTTACACAGGTCCTCGCCCT 22850 Query 225993 CCTC 225996 |||| Sbjct 22851 CCTC 22854 >seq27 Length=62815 Score = 125 bits (138), Expect = 1e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || ||| ||| || |||||||| || ||| || || | || || || | ||| Sbjct 52887 GTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCCTCGAGCTG 52946 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || ||||| || || | |||||||| || |||||||| ||||| || || ||||| Sbjct 52947 CTTACCAGCGAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTATCCTGGATCTT 53006 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 |||||||| ||||| ||||| | || || || || | |||||| || || || || Sbjct 53007 GGCCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTCTTGCCAGT 53066 Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461 || ||||||||||| || ||||| Sbjct 53067 CAGAGTCTTGACGAAGATTTGCAT 53090 >seq87 Length=38730 Score = 91.5 bits (100), Expect = 3e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || ||||| ||||||||||| | || | || ||||| | ||| | |||||||| Sbjct 12617 TAGCGCCAGCGGATGTACTGGCATGCACTCTTCTCGAGGTGCTGCTCGAGGTGGTGGAAT 12558 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097 || ||||| || | ||||| |||| ||| || |||||| || |||| ||| Sbjct 12557 GCGTGCTGCGCCATCATCGCCACACGCAGGTTCGGGTGCTTCTCGACCTTGCCCTCCGTC 12498 Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157 || |||||||||||| |||||||| || ||| ||||||||||||| || || || Sbjct 12497 GGAATGATCTCGCCGGTGAGCACCTTGATCAGGGTACTCTTGCCCGCACCGTTCGGACCC 12438 Query 225158 ATCACGCC 225165 | ||| || Sbjct 12437 ACCACACC 12430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921619761855880