Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq8 414 2e-110 seq14 381 1e-100 >seq8 Length=40485 Score = 414 bits (458), Expect = 2e-110 Identities = 627/872 (72%), Gaps = 44/872 (5%) Strand=Plus/Plus Query 42292 ACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGA 42351 |||| || |||||| |||||||||||||| || || ||||||||||||||||| Sbjct 4672 ACCACGAGATCTGGCAGATGTACAAGAAGGCCGAGGCGTCGTTCTGGACCGCCGAGGAGA 4731 Query 42352 TTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTCC 42411 | |||||| | |||||| | || |||||| ||| | ||| |||| || || Sbjct 4732 TGGACCTGTCGAAGGACCTGCACGACTGGGAC-CACCGCATGA--ACGACAATGAGCGCC 4788 Query 42412 TCA----AAAACATA--CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACC 42465 | || ||| ||||||||||| || ||||| |||||||| ||||| ||||||| Sbjct 4789 ACTTTGTAAGCCATGTCCTGGCCTTCTTTGCTGCCTCAGACGGCATCGTCAACGAGAACC 4848 Query 42466 TGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCC 42525 ||| | |||| ||||||||| | |||||| ||||||||||||||||| | Sbjct 4849 TGGTGGAGCGCTTCAGCGCCGAGGTGCAGGCCGCTGAGGCCCGCTGCTTCTACGGCTTTC 4908 Query 42526 AGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACA 42582 |||| || |||||| | ||||| ||| |||| | || |||| ||||||||| Sbjct 4909 AGATTATGATGGAGAACATCCACTCGGAGACGTACTCG---CTCCTCATTGACACGTACA 4965 Query 42583 TCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTG-CATC 42641 ||| || | | |||| | || || || ||||| ||||| || ||||| | || Sbjct 4966 TCCGTGAGTCGGAGCAGCGCGAATACCTCTTTAACGCCATCGAGACCAT-CCCTGTCGTC 5024 Query 42642 AAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGA 42700 ||| ||||||| || ||||| | ||||||| | | | | ||| ||||| || Sbjct 5025 AAGCAGAAGGCCGAGTGGGCCTTGCGCTGGATCTCG-GACAAGCGCGCCTCGTTCTCGGA 5083 Query 42701 GAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCAT 42760 | | ||||| |||||| ||||||||||||||||||| ||||||||| | || |||||||| Sbjct 5084 GCGCCTGGTCGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCCAT 5143 Query 42761 CTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCA 42819 ||| ||||||||| || ||| || ||||| || || | ||||||||||| |||||| Sbjct 5144 CTTTTGGCTCAAGAAGCGCGGTCTC-ATGCCTGGCCTGTCGTTCTCGAACGAGCTCATCT 5202 Query 42820 GCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGC 42879 | |||||||| ||||| | ||||||||||||||| ||||| |||||||| | Sbjct 5203 CGCGTGACGAGGGTCTGCACACCGACTTTGCCTGCCTCTTGTTC---AGCCACCT---GA 5256 Query 42880 ACAAGCCCTCGAA---GGAGCGGGT---CCGGGCCATCATCACGGAGGCCGTGGAGATCG 42933 | |||| | || | || ||| ||| ||||||||| |||||||||| || | Sbjct 5257 AGAAGCGCGCGCACCCCGACACGGTGAACCG---CATCATCACCGAGGCCGTGGCCATTG 5313 Query 42934 AGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAAC-CACGACCTC 42992 || |||| || | || | | |||||||| || ||| ||||||||||| | || |||| Sbjct 5314 AGCAGGACTTTTTGACCGACGCCCTGCCCGTCTCGCTGATCGGCATGAACGCGCG-CCTC 5372 Query 42993 ATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGC 43052 |||||| ||||||| ||| || ||||||| || ||| | | | || || || | Sbjct 5373 ATGTGCCAGTACATTGAGTTTGTGGCCGACCGCCTGCTGGTCAACCTCGG---CAACCCC 5429 Query 43053 ---CTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAG 43109 | ||||||| || || |||||| ||||||||||||||||| ||| | |||||||| Sbjct 5430 AAGCACTACAACTCGGCGAACCCCTTTGACTTTATGGAGAACATTTCGCTCCAGGGCAAG 5489 Query 43110 ACCAACTTTTTCGAGAAGCGCGTCGCCGACTA 43141 | |||||||||||| ||||| |||||||| Sbjct 5490 TCGAACTTTTTCGAGCGCCGCGTGGCCGACTA 5521 >seq14 Length=25249 Score = 381 bits (422), Expect = 1e-100 Identities = 1298/1982 (65%), Gaps = 69/1982 (3%) Strand=Plus/Minus Query 243877 GTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTCTGCGGCCATGGTGATGAGGT 243935 ||||||| ||||||||| || || | |||| || || || |||||| || | Sbjct 7983 GTTGAGGCTTTGGCTCTGGCACACAAACG-CGCCACGGTCCGCAGCCATGTCAATAATCA 7925 Query 243936 CCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTT 243995 |||| || ||||| || |||||||||||| || ||||| ||| ||||| | || Sbjct 7924 CCTTTTGGCTAATCTCCCACACCGTCTTGTAGAGGGCCTTGATGTGGTCGGGAATGCCAG 7865 Query 243996 CGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCG-CATGTTATCGTTCCAC 244054 | |||||||| | |||||| ||| | || | || ||| ||| |||||||| Sbjct 7864 CAATGTTCTGGATCGAGCCGCCGTGCGCAATAATCTTT-TGCTTCATCGAGTCGTTCCAG 7806 Query 244055 AGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCT---GTTCACCACCTGAAACTCTCCC 244111 || |||| |||| | |||| ||| ||| ||| |||||||| ||||| ||| Sbjct 7805 AGACCCA---GCTCGACAAGCTCGCGCAGCAGCCACGGGTTGACCACCTGGAACTCGCCC 7749 Query 244112 GACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCC 244171 | ||| || |||||| ||| | |||||| || |||||| | || ||| || ||| Sbjct 7748 GCCAGTACACGGCGCATGTAAATGTTGCTCGTGTACGGCTCAAAGCACTCGTTGAAGCCG 7689 Query 244172 AGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCG 244231 || ||||| |||| || |||||||| |||| || |||||| ||||| || ||| Sbjct 7688 AGGATCTGGCTCGTGGAGGCCGTCGGCATCGGCGCCATCAGCAGCGAGTTCCGCAGACCG 7629 Query 244232 TGCCTCTGGATGCGGAGTCT-GAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCG 244290 ||| | | | | | | || |||| | ||||||||||| | ||| | | ||| Sbjct 7628 TGC-TGGGCAATCTGCGCCTTGAGCGTGGCCCAGTCCCACAGGTCCGTCGG---CGGGCG 7573 Query 244291 TTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGT 244350 || ||||| ||| ||||||| || |||| | |||||||||||||||| || Sbjct 7572 GTT------CCACAGGTCGTACTGCAGGAGGCCCTGCGAGGCGGGGCTGCCCTCGTACGT 7519 Query 244351 CGGGTAGGGACCGT---CGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTA 244407 | ||| || || | || || | |||||| ||||| || ||||| || | ||| Sbjct 7518 CTCGTACGGGCCATATTCG-GCAG--CCAGCTCGCAGCTGCGCTCCAGGGCCGCATGGTA 7462 Query 244408 GATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCC 244467 ||||||||||||||| | ||||| ||| |||| || | ||| || ||| Sbjct 7461 GATGGTCTCGAAGATTTGCACGTTCAGCAGGCGCGCCTCCTGGCTGTCGAACGGATAGCC 7402 Query 244468 CATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTT 244527 ||| |||||||| | ||||| || ||||| || ||||| || ||||| | ||| ||| | Sbjct 7401 CATGATCATGAACGCATCGGCAAGACCCTGGACACCGATACCAATGGGCCGGTGACGCAT 7342 Query 244528 GTTGGAGCG-CATG-GCT-TCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAG 244584 ||| ||||| | | ||| || ||||||||| ||||| |||||| | ||| || Sbjct 7341 GTTCGAGCGGCGCGCGCTCTC---CACGGGGTAGTAGTTGATGTCGATGATGCGGTTCAG 7285 Query 244585 GTTGCGGGTGATCA--TGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGA 244642 ||| | | || | || || ||||| ||| |||| |||| |||| | Sbjct 7284 GTTCTTGCACACCACCTTCG-AC-ACGTCATGCAGGCGCTGGAAGTTGTAC------GTC 7233 Query 244643 TCCTCGGCGATGGTGATCCTC-ACAAAC-TCGTTGAGGGCGACGCTGGCCAGGTTGCAGA 244700 | | |||| |||| |||| | ||| ||| || || | ||||||||||| | Sbjct 7232 TTCGAGGCGCCGGTGC-CCTCGATGAACGTCGGC-AGCGCAATCGACGCCAGGTTGCACA 7175 Query 244701 CGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGA 244760 | ||| ||| |||| | |||||| || |||||| ||||| ||||| || ||||| Sbjct 7174 CAGCCGTCTCGTCCGGCGAGCTGTACTCGATAATCTCCGTGCACAGGTTCGAGCTCTTGA 7115 Query 244761 TGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGG 244820 | |||||||||| || || ||| |||| ||| | ||||||||| || | ||||| Sbjct 7114 TCGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTCGCCGAGTCCTTGTACAGGACGAAGG 7055 Query 244821 GCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCG 244880 | || ||||||| ||| || |||| | | | ||| || | | |||||||| | Sbjct 7054 GGTTGCCCGTCTCGATCTGTGCCTCGAGAATGGCATACCACAGCTTCTGCGCCTTGACAG 6995 Query 244881 TCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCC 244940 | || |||||| |||||| ||| || || || || || ||| Sbjct 6994 AGCGCTTGGCGCGGCCCTCGCGCTCGTATTTCTCGTAGAGAGCATCAAATTCTTCGCCAT 6935 Query 244941 AGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCT 245000 || ||| | |||||||||||| || |||||||| || ||| |||||| | || Sbjct 6934 AGCAGTCGGCCAGGCCGGGGCACTCGGCGGGGCACATCAGCGACCAGTCGCCGTTCTGCT 6875 Query 245001 TGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCT 245060 ||| | ||||||| | ||| || ||||| || ||| |||| ||||| | | | | Sbjct 6874 CGACGCGGCGCATGAACAAGTCAGGAATCCACAGCGCCAGGAACAGGTCGCGCGCGCGCA 6815 Query 245061 GCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGG 245120 ||| ||| || ||| || | ||| || | || || || ||||| |||||| | Sbjct 6814 CCTCCTCCTTACCGTGGTTTTTGCGCAGATCAATGAACTCGAACACGTCCGAGTGCCACG 6755 Query 245121 GCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCT 245180 |||||| ||||| || | ||| ||||| ||||||||||| ||||||||||| | | Sbjct 6754 GCTCCAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCCACGTAGCGCG 6695 Query 245181 CGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCT 245240 | |||| | | ||| || | ||||| || ||||| ||| || || || Sbjct 6694 CTGTGTTGTTGTATACGCGGAGCATGGGCACAATACCGTTGCTCACGCCATTCGTACCGG 6635 Query 245241 TGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCT 245300 ||||| | |||| | | | || |||| ||| || || | || ||||| || Sbjct 6634 CAATGTACGAGCCCGTTGCACGGATGTTGTGGATATTCAGACCAATACCACCGGCCGTCT 6575 Query 245301 TGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCA 245360 || ||| | ||||| |||||| ||||| || ||||| || ||| ||||| Sbjct 6574 TGCTGATCATCGCGCACGTCTTGAGCGTGTCGTAGATACCCTCGATAGAGTCGTCCTTCA 6515 Query 245361 TGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGG 245420 || | | || |||||||| |||| ||||| ||||| ||| | |||||||| || | Sbjct 6514 TGCTCACAAGGAAGCAGGACGACATTTGGGGGTTGGGCGTGCCAGCATTGAACAGGGTCG 6455 Query 245421 GGCTGGCGTGGGTAAAGTAGCGGCTC-GAGAGGAACCCGTACGTCTGGA-GCAGAGCGTC 245478 | ||||| |||||| | ||| || | | | ||| |||| | | | | || Sbjct 6454 GCGACGCGTGTGTAAAG-GCCTTCTCGGACATGTAGTTGTATGTCTCAATGGCGCTCTTC 6396 Query 245479 GATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTGGGGCGTCTCGAT 245538 | | ||||||||||| || ||| | |||||| |||||||||| ||| Sbjct 6395 -ACATCCTCGCCGTGGATGCCCACAGCGACACGCATGAGCATGTGCTGGGGGCGCTC--C 6339 Query 245539 GGGTCCCTCGGGTCCCTTG------AGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAA 245592 | | || | || ||| |||| |||||||||||| ||||||||||| || || Sbjct 6338 GCGACCTT----GCCATTGATGCGCAGCAGGTAGGAGCGCTCCAGCGTCTTGAAGCCGAA 6283 Query 245593 GTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAGTCTCTCGGCGTGCTT 245652 | |||| ||||||| | || |||| || | |||||| | ||| |||||| Sbjct 6282 AAAGTTGTAGTGAAAGTCGCGCTCGTAAATGACCGCCGAGTCGAGCGTGTCGCGGTGCTT 6223 Query 245653 C-TGACTGACCTCGTAAAACTTTTGCGCTATGAGGGGAGCCCTG-AGCCCGGTGTCCGGA 245710 | | || | ||||||| || | | || | ||| || || || || | || Sbjct 6222 CATCAC-GGCCTCGTACGTCTCCTTGGAGATCATGGG-GCTGTGCTTCCTCGTCTTGGGG 6165 Query 245711 TTGACGTTGAACCAGAGCCTCTTGCA-CACCTCCGAGAACTTGGGGCTGGTGAGCTTATG 245769 || || | | | || || |||| ||| | ||| || |||| |||||| Sbjct 6164 TTCACATAGTCGTACAG-GTCCTGCACCACATGGCTGAAGTTCTTCTTGGTTTCCTTATG 6106 Query 245770 CAGGTTGGTGACTGCTATGCGCGCCGCCAACTTGCTGTAGTCGGGGTGAGTGGTGGTCAT 245829 ||||||| ||| || || ||||| || | | | |||||||||||| ||||||||| | Sbjct 6105 CAGGTTGCTGATCGCAATACGCGCGGCGAGCACGGCGTAGTCGGGGTGGGTGGTGGTCTT 6046 Query 245830 GT 245831 || Sbjct 6045 GT 6044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944336496829040