Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq14 288 1e-72 seq8 230 2e-55 seq102 141 9e-29 seq27 116 4e-21 seq105 98.7 1e-15 >seq14 Length=25249 Score = 288 bits (318), Expect = 1e-72 Identities = 1182/1813 (65%), Gaps = 73/1813 (4%) Strand=Plus/Minus Query 152685 TCAACGGTAAACTGTTGTGTGTGCGCCGCAGGCTTTGTGCGCAAATAATACATGCCCGTT 152744 || ||||| ||||| | ||||| ||||| |||||||| || ||| |||||| Sbjct 8114 TCCACGGTGAACTGGATCGCCTGCGCAGCAGGACGCGTGCGCAAGTAGTACGAGCCCGTC 8055 Query 152745 TTGAGGCCGCAGCGCCACGAGTAATTGTGAATCGAAGTCATCACAGCGTACGTCGGTTGC 152804 |||||||| ||| |||| ||| ||||| || | | | | | ||||| || Sbjct 8054 TTGAGGCCCTTCTTCCAGCCGTAAAAGTGCATCGACGTAAGCTGACCAAAGGTCGGC-GC 7996 Query 152805 GC-CACGAACAGATTAAACGATTGGCTCTGATCTATGAAAGCGTTACGGTCGGCCGCCAT 152863 || || | | || | ||||||||| | || ||| |||||| || ||||| Sbjct 7995 GCTCAGGTGAATGTTGAGGCTTTGGCTCTGGCACACAAACGCGCCACGGTCCGCAGCCAT 7936 Query 152864 CTCAATCATG-CGTTTTGCCTTCATCTCCCAGGCGGTTTTGTACAAATTTTTAACGCTAT 152922 ||||| || | ||||| || |||||||| | || ||||| | || | | | Sbjct 7935 GTCAATAATCACCTTTTGGCTA-ATCTCCCACACCGTCTTGTAGAGGGCCTTGATGTGGT 7877 Query 152923 CCGGTATACCTTCAATGTTCTGAATAGAGCCCTTGTGTGCAAAAATAGCGTTTCGTATTT 152982 | || || || |||||||||| || ||||| ||| |||| ||| | ||| | | Sbjct 7876 CGGGAATGCCAGCAATGTTCTGGATCGAGCCGCCGTGCGCAATAAT--CTTTTGCTTCAT 7819 Query 152983 CGGG-CGTGT-ACACGTTCAGTTTAATGAGGTCATCGATCAAGTACTGGTTGACCACTTG 153040 || | ||| | | ||| | | || || | || || |||||||||| || Sbjct 7818 CGAGTCGTTCCAGAGACCCAGCTCGACAAGCTCGCGCAGCAGCCACGGGTTGACCACCTG 7759 Query 153041 AAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAGGTTCAAAGGATTC 153100 ||||||||||||| || || | || || | ||||| ||| | || |||||| | || Sbjct 7758 GAACTCGCCCGCCAGTACACGGCGCATGTAAATGTTGCTCGTGTACGGCTCAAAGCACTC 7699 Query 153101 GTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCACCAACAAAGAATT 153160 ||| ||| || || || ||||| || |||||||| ||||| || || || || Sbjct 7698 GTTGAAGCCGAGGATCTGGCTCGTGGAGGCCGTCGGCATCGGCGCCATCAGCAGCGAGTT 7639 Query 153161 CCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCCACAGCGCCGACGG 153220 ||||| |||||| ||| | |||| | || ||| |||||||| ||| ||| Sbjct 7638 CCGCAGACCGTGCTGGGCAATCTGCGCCTTGAGCGTGGCCCAGTCCCACAGGTCCGTCGG 7579 Query 153221 TGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGACTGCCGGCAAACGT 153280 | |||||||| ||||||||| | | || | |||||| ||||| | |||| Sbjct 7578 CGGGCGGTTCCACAGGTCGTACTGCAGGAGGCCCTGCGAGGCGGGGCTGCCCTCGTACGT 7519 Query 153281 ACTGTAGCTGCCGTCGCGTTGG--GCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTAT 153338 ||| ||| | | || ||||| |||||||| ||| || || ||| ||| Sbjct 7518 CTCGTACGGGCCAT--ATTCGGCAGCCAGCTCGCAGCTGCGCTCCAGGGCCGCATGGTAG 7461 Query 153339 ATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTCGTACGGCATGCGC 153398 ||||| ||| |||||| || || | | ||| || | ||| ||| |||| || | Sbjct 7460 ATGGTCTCGAAGATTTGCACGTTCAGCAGGCGCGCCTCCTGGCTGTCGAACGGATAGCCC 7401 Query 153399 AGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGTCGATGCTTCTCG 153458 | | || || || ||||| |||||||||| ||||| || ||||| || || | | Sbjct 7400 ATGATCATGAACGCATCGGCAAGACCCTGGACACCGATACCAATGGGCCGGTGACGCATG 7341 Query 153459 TTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTT- 153517 || ||| | ||||||| | | ||| |||| ||| ||||| || ||| ||||| Sbjct 7340 TTCGAGCGGCGCGCGCTCTCCACGGGGTAGTAGTTGATGTCGATGATGCGGTTCAGGTTC 7281 Query 153518 GCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGGTCATTTCGTCGAC 153577 ||| |||||| || | | | | || || ||| | || ||| | | || | Sbjct 7280 TTGCA-CACCACCTTCGACACGTCATGCAGGCGCTGGAAGTTGTACGTCTTCGAGGCGCC 7222 Query 153578 GCGTACGCATCGATTCACG--------GCAATAGACGCCAGATTACAGACGGCCGTCTC- 153628 | || | | ||||| ||| ||||| |||||||| || || || |||||||| Sbjct 7221 G-GTGC-CCTCGATGAACGTCGGCAGCGCAATCGACGCCAGGTTGCACACAGCCGTCTCG 7164 Query 153629 TTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAA 153688 | ||||| |||||||| | ||||| | ||| ||||| || || || ||||| Sbjct 7163 TCCGGCG-AGCTGTACTCGATAATCTCCGTGCACAGGTTCGAGCTCTTGATCGTGCCCAG 7105 Query 153689 ATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGT 153748 || | ||| ||||| ||||| || || ||| ||| | || | | | || ||| || Sbjct 7104 GTTCTTCTGGTTGCTCTTGCGGTTCGCCGAGTCCTTGTACAGGACGAAGGGGTTGCCCGT 7045 Query 153749 CTCGACTTGCGTTTCGACGAT---AAACCTATGCAGGTCCTGCGC--TCGCA-CCCGC-T 153801 ||||| || | |||| || | ||| ||| | |||||| | || ||| | Sbjct 7044 CTCGATCTGTGCCTCGAGAATGGCATACC---ACAGCTTCTGCGCCTTGACAGAGCGCTT 6988 Query 153802 GCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGC 153861 | | ||||||||||| ||||||| |||||| || ||||| || ||||| |||| Sbjct 6987 GGC----GCGGCCCTCGCGCTCGTATTTCTCGTAGAGAGCATCAAATTCTTCGCCATAGC 6932 Query 153862 AGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCG-TCGGCGTTG 153920 ||||||| |||||||| |||| || |||||||||||||| || || || | | Sbjct 6931 AGTCGGCCAGGCCGGGGCACTCGGCGGGGCACATCAGCGACCAGTCGCCGTTCTGC-TCG 6873 Query 153921 ACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCA- 153979 ||||| |||||||||| || || | ||| ||||| | |||||||||| | ||| Sbjct 6872 ACGCGGCGCATGAACAAGTCAGGAATCCACAGCGCCAGGAACAGGTCGCGCG-CGCGCAC 6814 Query 153980 ATCCTCC---GCGCCCATGTTGCGTTTCAGATTGA-GCACGCTATAGATGTCGGCGTGCC 154035 |||||| || | ||||| ||||| | | || | | | | ||| | ||||| Sbjct 6813 CTCCTCCTTACCGTGGTTTTTGCG---CAGATCAATGAACTCGA-ACACGTCCGAGTGCC 6758 Query 154036 AGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATCGACGTGGC 154092 | || || | ||||| ||| | |||||| |||| || || ||||| || |||| || Sbjct 6757 ACGGCTCCAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCCACGTAGC 6698 Query 154093 GCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGC-GGTGCCGTTGGT- 154150 || | | |||||| | ||||| | |||||| | | ||| |||| ||| || || Sbjct 6697 GCGCTGTGTTGTTGTATACGCGGAGCATGGGCACAATACCG-TTGCTCACGCCATTCGTA 6639 Query 154151 --CGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCC- 154207 | | || | || ||| || || | | || | || | ||||| || || Sbjct 6638 CCGGCAATGTACGAGC--CCG-TTGCACGGATGTTGTGGATATTCAGACCAATACCACCG 6582 Query 154208 GCCGTACTT--TGAT-ATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCT 154264 ||||| ||| |||| || || || | ||| ||||| |||||| || ||||| Sbjct 6581 GCCGT-CTTGCTGATCATCGC-GCAC-GTC-TTGAGCGTGTCGTAGATACCCTCGATAGA 6526 Query 154265 ATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGA 154324 ||||| | || | | ||| || || ||||||| || || |||| || || Sbjct 6525 GTCGTCCTTCATGCTCACAAGGAAGCAGGACGACATTTGGGGGTTGGGCGTGCCAGCATT 6466 Query 154325 AAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGAT 154384 || ||||| || |||||| ||||| || | | ||| | ||| || || || Sbjct 6465 GAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTCGGACATGTAGTTGTATGTCTCAAT 6406 Query 154385 GGCG-TCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCG 154443 |||| ||||| | ||| |||||||| ||||| | ||||| ||||||||||||||||| | Sbjct 6405 GGCGCTCTTC-ACATCCTCGCCGTGGATGCCCACAGCGACACGCATGAGCATGTGCTGGG 6347 Query 154444 GACGTTCGGCGAC 154456 | || || ||||| Sbjct 6346 GGCGCTCCGCGAC 6334 >seq8 Length=40485 Score = 230 bits (254), Expect = 2e-55 Identities = 351/499 (70%), Gaps = 11/499 (2%) Strand=Plus/Plus Query 52344 AAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCCACGCTGGCCGAGCGCATG 52403 ||||| ||||||| || |||||| | | | |||| || | | |||||| || Sbjct 5031 AAGGCCGAGTGGGCCTTGCGCTGGATCTCGGACAAGCGCGCCTCGTTCTCGGAGCGCCTG 5090 Query 52404 GTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTAC 52463 || ||||| ||| ||||||||| | ||||| || ||| |||||| ||||||||| Sbjct 5091 GTCGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCCATCTTTTGG 5150 Query 52464 ATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGAC 52523 | || | | || | ||||| |||||| ||||| |||||| | || ||||| ||| Sbjct 5151 CTCAAGAAGCGCGGTCTCATGCCTGGCCTGTCGTTCTCGAACGAGCTCATCTCGCGTGAC 5210 Query 52524 GAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTG 52583 || || |||||||| |||||||| ||||||| | || | | | | ||| || | Sbjct 5211 GAGGGTCTGCACACCGACTTTGCCTGCCTCTTGTTCA-GCCAC------CTGAAGAAGCG 5263 Query 52584 G----ATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTT 52639 | | |||||| | |||| ||| ||||| ||||| || || |||| || Sbjct 5264 CGCGCACCCCGACACGGTGAACCGCATCATCACCGAGGCCGTGGCCATTGAGCAGGACTT 5323 Query 52640 TTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTA 52699 ||| || | ||| ||||| ||| |||| | ||||||||||||| ||||||| |||| Sbjct 5324 TTTGACCGACGCCCTGCCCGTCTCGCTGATCGGCATGAACGCGCGCCTCATGTGCCAGTA 5383 Query 52700 CATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGC 52759 ||| ||||||||||| || || ||| |||| | ||||| | || ||| ||| |||| | Sbjct 5384 CATTGAGTTTGTGGCCGACCGCCTGCTGGTCAACCTCGGCAACCCCAAGCACTACAACTC 5443 Query 52760 TCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGA 52819 || || ||||| |||||| | ||||||||||| |||||||| | ||||||||||| Sbjct 5444 GGCGAACCCCTTTGACTTTATGGAGAACATTTCGCTCCAGGGCAAGTCGAACTTTTTCGA 5503 Query 52820 GAAGCGAGTCGGCGAGTAT 52838 | || || | ||| ||| Sbjct 5504 GCGCCGCGTGGCCGACTAT 5522 >seq102 Length=51898 Score = 141 bits (156), Expect = 9e-29 Identities = 150/194 (77%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| |||||| ||||| || || ||||| | | | Sbjct 8988 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCCAGCTGCTTACCAGCAAA 8929 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 ||| |||||||||||||||||||| ||||| || ||||| ||| | || | || | | Sbjct 8928 GATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTC-CTGAATCTTGGCCTTGACGT 8870 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | ||||| | ||| |||||||||| || | ||| || ||||| || || ||| Sbjct 8869 TG-TCGATCGTGTCCGACGATTCCACCTCGAGGGTAATCGTCTTGCCAGTGAGGGTCTTT 8811 Query 138601 ACAAAAATCTGCAT 138614 |||||||| ||||| Sbjct 8810 ACAAAAATTTGCAT 8797 Score = 123 bits (136), Expect = 2e-23 Identities = 146/194 (75%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| |||||| ||||| || || ||||| | | | Sbjct 9216 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCCAGCTGCTTACCAGCAAA 9157 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTAAT 138540 ||| |||||||||||||||||||| || || || ||||| ||| | || | || || Sbjct 9156 GATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTC-CTGAATCTTGGCCTTGACAT 9098 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | ||||| | ||| |||||||||| | | ||| || ||||| || || || Sbjct 9097 TG-TCAATCGTGTCCGACGATTCCACCTCGAGGGGAATCGTCTTGCCAGTGAGGGTCTTG 9039 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 9038 ACGAAGATCTGCAT 9025 >seq27 Length=62815 Score = 116 bits (128), Expect = 4e-21 Identities = 145/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| || || ||||||||| || ||||| | | Sbjct 52899 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 52958 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 || |||||||||||||||||||| || || || || || ||| || || | ||| Sbjct 52959 AATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACATT 53018 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | ||||| | ||||| ||||| | || | ||| || ||||||||||| || | Sbjct 53019 G-TCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTCTTGCCAGTCAGAGTCTTGA 53077 Query 138602 CAAAAATCTGCATGGC 138617 | || || |||||||| Sbjct 53078 CGAAGATTTGCATGGC 53093 >seq105 Length=229645 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| || || ||||| || || || || | | Sbjct 227277 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCCTCCAGCTGCTTGCCCGCGAA 227218 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| || |||||||||||||| || ||||| || ||||| ||| || || | | Sbjct 227217 GATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 227158 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||||||| | || | ||| || || ||||| || || || Sbjct 227157 CTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCGGTCAGGGTCTTGAC 227098 Query 138603 AAAAATCTGCATGG 138616 || | ||||||| Sbjct 227097 GAACACTTGCATGG 227084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496260979448880