Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq8 183 3e-41 seq14 138 1e-27 seq27 122 8e-23 seq102 116 4e-21 seq105 104 2e-17 seq22 84.2 2e-11 >seq8 Length=40485 Score = 183 bits (202), Expect = 3e-41 Identities = 307/442 (69%), Gaps = 13/442 (3%) Strand=Plus/Plus Query 47143 TGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTT 47202 || |||| || ||| |||||||||| |||| ||||||||| ||||| | || |||| Sbjct 5089 TGGTCGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCCATCTTTT 5148 Query 47203 ACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAG 47262 | || | || | ||||| ||||| |||| |||||||| |||||| | | Sbjct 5149 GGCTCAAGAAGCGCGGTCTCATGCCTGGCCTGTCGTTCTCGAACGAGCTCATCTCGCGTG 5208 Query 47263 ACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAAC-ACTAGAGTCGATCAAAAG 47321 |||| || ||||||||| |||||||||| |||| | || | || || | ||| Sbjct 5209 ACGAGGGTCTGCACACCGACTTTGCCTGCCTCTTGTTCAGCCACCTGA-------AGAAG 5261 Query 47322 TTGGACGTGCCC----ACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGA 47377 | || ||| || || | | ||| | |||| ||||| ||||||||| ||| Sbjct 5262 CGCG-CGCACCCCGACACGGTGAACCGCATCATCACCGAGGCCGTGGCCATTGAGCAGGA 5320 Query 47378 GTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAA 47437 ||||| |||| || ||||||| || | | || ||||||||| | ||| | | Sbjct 5321 CTTTTTGACCGACGCCCTGCCCGTCTCGCTGATCGGCATGAACGCGCGCCTCATGTGCCA 5380 Query 47438 GTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCA 47497 |||||| || ||||| |||||||||||||| || | || | |||||| ||| | Sbjct 5381 GTACATTGAGTTTGTGGCCGACCGCCTGCTGGTCAACCTCGGCAACCCCAAGCACTACAA 5440 Query 47498 CACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTT 47557 | | | ||| || || || |||||| | |||||||||||| |||||||| | |||||||| Sbjct 5441 CTCGGCGAACCCCTTTGACTTTATGGAGAACATTTCGCTCCAGGGCAAGTCGAACTTTTT 5500 Query 47558 CGAGAAGCGCGTCGGCGAATAT 47579 |||| ||||| | ||| ||| Sbjct 5501 CGAGCGCCGCGTGGCCGACTAT 5522 >seq14 Length=25249 Score = 138 bits (152), Expect = 1e-27 Identities = 1155/1829 (63%), Gaps = 90/1829 (5%) Strand=Plus/Minus Query 145719 GTCGACGGTGAACTGCGTCGCTTGAGCGGCCGGTTTTGTGCGCAGATAGTACATGCCGGT 145778 ||| ||||||||||| |||| || || || || ||||||| |||||| ||| || Sbjct 8115 GTCCACGGTGAACTGGATCGCCTGCGCAGCAGGACGCGTGCGCAAGTAGTACGAGCCCGT 8056 Query 145779 CTTGAGCTGTTTCTGCCACGTGTAAAAGTGTATGCTCGACA--TGACCGAGTACGTGGGT 145836 |||||| |||| ||| ||||||||| || || | ||||| | | || || Sbjct 8055 CTTGAGGCCCTTCTTCCAGCCGTAAAAGTGCATCGACGTAAGCTGACCAA--AGGTCGGC 7998 Query 145837 TCGGCGACAAACAAATTTAGAGA--TTGGCTCTGATCAATGAAAGGAGCC-CGGTCGGCG 145893 || || ||| | ||| ||||||||| || ||| | ||| ||||| || Sbjct 7997 GCGCT--CAGGTGAATGTTGAGGCTTTGGCTCTGG-CACACAAACGCGCCACGGTCCGCA 7941 Query 145894 GCCATGTCTATCATGCACTTTGATTTAATTTCCCATGCGGTTTTAAAGAGATCCTTGACG 145953 |||||||| || || |||| |||| ||||| | || || |||| |||||| | Sbjct 7940 GCCATGTCAATAATCACCTTTTGGCTAATCTCCCACACCGTCTTGTAGAGGGCCTTGATG 7881 Query 145954 TGCTGGGGTATTTCGTCAATGTTCTGCACAGACCCATTTTCGGCCAATATTTTGTTGCGC 146013 || | ||| || | |||||||||| | || || | || |||| | | |||| Sbjct 7880 TGGTCGGGAATGCCAGCAATGTTCTGGATCGAGCCGCCGTGCGC-AATAATCTTTTGC-- 7824 Query 146014 AATTC-TGGAGT-GTA--AATGTTCAAG-TCTACGAGGGCCTTGATGAGATACTGGTTGA 146068 ||| | |||| || | | | || || || || | | || || |||||| Sbjct 7823 --TTCATCGAGTCGTTCCAGAGACCCAGCTCGACAAGCTCGCGCAGCAGCCACGGGTTGA 7766 Query 146069 CCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGA 146128 ||||||| |||||||| || || || || | || || | |||||| ||| ||||||| | Sbjct 7765 CCACCTGGAACTCGCCCGCCAGTACACGGCGCATGTAAATGTTGCTCGTGTACGGCTCAA 7706 Query 146129 ACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGCA 146188 | |||||||| ||||| ||||| ||| | || || ||||| ||||| ||||| Sbjct 7705 AGCACTCGTTGAAGCCGAGGATCTGGCTCGTGGAGGCCGTCGGCATCGGCGCCATCAGCA 7646 Query 146189 AAGAGTTTCTCACGCCGTGTCTTTG-AATCTTTTCCCGTAGTTTGGACCAATTCCACAAA 146247 ||||| | || ||||| || | ||||| || || ||| ||| | ||||| Sbjct 7645 GCGAGTTCCGCAGACCGTG-CTGGGCAATCTGCGCCTTGAGCGTGGCCCAGTCCCACA-- 7589 Query 146248 TGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCCGCGGAACAGGGGGCTA 146307 | ||||| || | || | |||||| |||| ||| | | |||||| Sbjct 7588 -GGTCCGTCGGCGGGCGGTTCCACAGGTCGTACTGCAGGAGGCCCTGCGAGGCGGGGCTG 7530 Query 146308 TTCTCGTACGATTCATAAGGACCGTCGATCTTG--GCCAGTTCGCAGCTAGCTTCCAGAG 146365 |||||||| || || || || | || | ||||| |||||||| ||||| | Sbjct 7529 CCCTCGTACGTCTCGTACGGGCCAT--ATTCGGCAGCCAGCTCGCAGCTGCGCTCCAGGG 7472 Query 146366 CCGAAAAGTATATGGTCTCCGCGAT---CATGT--AGTTGACGCTCCTGGCCTCCTCGCT 146420 ||| | ||| |||||||| ||| || || || | ||| ||||||| ||| Sbjct 7471 CCGCATGGTAGATGGTCTCGAAGATTTGCACGTTCAGCAGGCGC-----GCCTCCTGGCT 7417 Query 146421 GTCGTAGGGGATATCG-AGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACACCAA 146479 |||| | || ||| | | | || || || ||||| |||||||| | |||| ||||| Sbjct 7416 GTCGAACGG-ATAGCCCATGATCATGAACGCATCGGCAAGACCCTGGACACCGATACCAA 7358 Query 146480 CGGGGCGGTGTTTCTTGTTACTGTT-CGCAGCGCCCGCAGTGGGATAGTGGTTGCTGTCG 146538 ||| ||||| | |||| | ||| |||| | | ||| |||| |||| ||||| Sbjct 7357 TGGGCCGGTGACGCATGTTCGAGCGGCGC-GCGCTCTCCACGGGGTAGTAGTTGATGTCG 7299 Query 146539 ATGATCTTGTTGAGATTAC-GCACGACAATTTTCGTCAAACGATTCAG---CAGGACATA 146594 ||||| ||| || || |||| || | |||| || || ||| | ||| | Sbjct 7298 ATGATGCGGTTCAGGTTCTTGCAC-ACCACCTTCGACACGTCATGCAGGCGCTGGAAGTT 7240 Query 146595 GTCAAATGTTTTAGTTT----TAACGTTGACGCACTTGTTGACGGCG--ATAGAGGCCAA 146648 || | | || || | | | || | || || | | ||| || || |||| Sbjct 7239 GT-ACGTCTTCGAGGCGCCGGTGCCCTCGATGAAC--GTCGGCAGCGCAATCGACGCCAG 7183 Query 146649 GTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCT 146708 ||| || || || ||||||||| || |||| | |||||| | ||| ||||| Sbjct 7182 GTTGCACACAGCCGTCTCGTCCGGCGAGCTGTACTCGATAATCTCCGTGCACAGGTTCGA 7123 Query 146709 GCACTTGATGATGCCCAAAtttttttGGTTACTAAACTTG---TTGCAGGGGTCCTTGTA 146765 || |||||| |||||| || || ||||| || |||| || | ||||||||| Sbjct 7122 GCTCTTGATCGTGCCCAGGTTCTTCTGGTTGCT---CTTGCGGTTCGCCGAGTCCTTGTA 7066 Query 146766 GAGCATGTACGGTCCCCCGGTTTCGACATTGGTCTCGACGATGAATCTAAACAAATCT-C 146824 || | | | || || || |||| | | ||||| ||| | | || | || | Sbjct 7065 CAGGACGAAGGGGTTGCCCGTCTCGATCTGTGCCTCGAGAATGG--CATACCACAGCTTC 7008 Query 146825 TG-GCCTTTACTTGTCTTTCGTACAGTTTATTCTTTTCGTATTTCTCGTACAATATTTCA 146883 || ||||| || | | | | | |||||||||||||| | ||| Sbjct 7007 TGCGCCTTGACAGAGCGCTTGGCGCGGCCCTCGCGCTCGTATTTCTCGTAGAGAGCATCA 6948 Query 146884 AAACTAGAACCGTACTCGTCGAGGAGGCCGGGATACTTTTTGGGACAGAACAGCGACCAT 146943 || || || |||| |||||||| ||| ||| || | ||||||||| Sbjct 6947 AATTCTTCGCCATAGCAGTCGGCCAGGCCGGGGCACTCGGCGGGGCACATCAGCGACCAG 6888 Query 146944 TCTTTATTCTCCTTCACGCGTTCCATAAACAAATCGGGAATCCAAAGGCCCAGCATCAAG 147003 || |||| || ||||| ||| ||||| || |||||||| || |||| | || | Sbjct 6887 TCGCCGTTCTGCTCGACGCGGCGCATGAACAAGTCAGGAATCCACAGCGCCAGGAACAGG 6828 Query 147004 TCGCGAGCCTTGGCGTCCTCGGAGCCCATGTTGCGTCTCAAGTTGAGGACATCGTAAATT 147063 ||||| || | ||||| || ||| | || | | || ||| | | Sbjct 6827 TCGCGCGCGCGCACCTCCTCCTTACCGTGGTTTTTGCGCAGATCAATGAACTCGAACACG 6768 Query 147064 TCCGGATGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTTTCGCTTA---CCGCCCTGA 147120 |||| ||||| ||||||| ||| ||| | || || ||||| || ||||| Sbjct 6767 TCCGAGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGG 6708 Query 147121 TCGACGTGGCGCACCATGTTATTGAAGACTCGTAACATGGACACGAGGCCGC------CG 147174 || |||| |||| | |||| ||| | || || | ||||| ||| | ||| || Sbjct 6707 TCCACGTAGCGCGCTGTGTTGTTGTATACGCGGAGCATGGGCACAATACCGTTGCTCACG 6648 Query 147175 GATTTTGTGGTGCCGTTGTATTGAGCGCT-------GACGCTTTGCACGCTCAGCCCGAG 147227 || || | | |||| |||| | || | | || | |||| || | Sbjct 6647 CCATTCGTACCGGCAATGTAC-GAGCCCGTTGCACGGATGTTGTGGATATTCAGACCAAT 6589 Query 147228 ACCTCCGCCCAGATTCGAAATCAAAGCGGAC-TCGTGCAAGGTCTTGTAGATGCCGTCGA 147286 ||| ||| || || |||| ||| || || || | || | |||||| || |||| Sbjct 6588 ACCACCGGCCGTCTTGCTGATCATCGCGCACGTCTTG-AGCGTGTCGTAGATACCCTCGA 6530 Query 147287 TGCTGTCTTCCTTGATGCATTGCAGGAAACACGAACACATTTGGGGACGACACGTGCCCG 147346 | ||| ||||| |||| ||||| || || |||||||||| |||||| | Sbjct 6529 TAGAGTCGTCCTTCATGCTCACAAGGAAGCAGGACGACATTTGGGGGTTGGGCGTGCCAG 6470 Query 147347 CCGCAAACAGCGTGGGGCTGGCGTGCGTGAACG--TGCCCAGACTCATCAATTGATACGT 147404 | ||||| || || ||||| || || | | | | ||| | | ||| || || Sbjct 6469 CATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTCGGACATGT-AGTTG-TATGT 6412 Query 147405 TTCAATGGCGCTCATAACGTCATCGCCGTGAATGGCCAGGGCGACGCGCATGAGCATGTG 147464 |||||||||||| | || || |||||||| ||| ||| ||||| |||||||||||||| Sbjct 6411 CTCAATGGCGCTCTTCACATCCTCGCCGTGGATGCCCACAGCGACACGCATGAGCATGTG 6352 Query 147465 CTGGGGTCGTTCCGCAATCACGTCATTGA 147493 |||||| || ||||| | | | |||||| Sbjct 6351 CTGGGGGCGCTCCGCGACCTTGCCATTGA 6323 >seq27 Length=62815 Score = 122 bits (134), Expect = 8e-23 Identities = 144/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||| |||| || |||||| || || ||||| || |||||| | Sbjct 52899 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 52958 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 |||| ||||| || || ||||| ||||||||||| ||| ||| || ||||| | Sbjct 52959 AATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACATT 53018 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||||||| | |||||| || | ||| | ||| ||||| |||||||| || || Sbjct 53019 GTCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTCTTGCCAGTCAGAGTCTTGAC 53078 Query 127102 AAAAATCTGCATGGC 127116 || || |||||||| Sbjct 53079 GAAGATTTGCATGGC 53093 >seq102 Length=51898 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| ||| | ||| | ||| ||| || || || ||||| |||| | Sbjct 9023 CCACCACGCAGACGCAGCACGAGATGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 8964 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || ||||| || ||||| |||||| ||||| || || ||||| Sbjct 8963 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGTTGGTCCGGAGGA 8904 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| || || ||||| ||||| ||| ||||||| || || Sbjct 8903 ATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGT-CGATCGTGTCCGACGATTCCAC 8845 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | ||| ||||| || || || ||||||||||| ||||| Sbjct 8844 CTCGAGGGTAATCGTCTTGCCAGTGAGGGTCTTTACAAAAATTTGCAT 8797 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| ||| | ||| | |||| ||| || || || ||||| |||| | Sbjct 9251 CCACCACGCAGGCGCAGCACGAGATGCAGCGTACTCTCCTTCTGGATGTTGTAGTCGCTC 9192 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || ||||| || ||||| |||||| ||||| || || ||||| Sbjct 9191 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGTTGGTCCGGAGGA 9132 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || || ||||| | || | ||||||| || || Sbjct 9131 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGATTCCACC 9072 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | ||| ||||| || || || || || || |||||||| Sbjct 9071 TCGAGGGGAATCGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 9025 >seq105 Length=229645 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | |||| ||| | || | ||| ||| || || || ||||| ||| Sbjct 227315 GCACCACCACGCAGGCGCAGCACGAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCG 227256 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || |||||| ||| || ||||| || || ||| |||||| ||||| || || || Sbjct 227255 CTCAGGGTGCGACCATCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGTTGGTCCGGG 227196 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || |||||||||||| ||| || ||| | | |||| ||||| | | ||| Sbjct 227195 GGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCC 227136 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 || || | ||| | ||| || |||||||| || || || || | ||||||| Sbjct 227135 ACCTCAAGGGTGATCGTCTTCCCGGTCAGGGTCTTGACGAACACTTGCATGG 227084 >seq22 Length=101165 Score = 84.2 bits (92), Expect = 2e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || |||||||| || |||| || | || | ||| ||| ||||| |||||||| ||| Sbjct 10437 GCACCACCGCGCAAACGCAGGACGAGGTGCAGCGTGCTCTCCTTTTGGATATTGTAGTCG 10496 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || || || ||| || ||||| || || || | |||| |||||||| || || Sbjct 10497 CTCAAAGTACGCCCATCCTCCAGCTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCCGGC 10556 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA 127037 || ||||||||||||||| ||| || ||||| Sbjct 10557 GGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGA 10590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475499438878960