Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq8 114 2e-20 >seq8 Length=40485 Score = 114 bits (126), Expect = 2e-20 Identities = 175/244 (72%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| |||||||||||||| |||||||| || |||||||| |||| || Sbjct 5233 GCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCCA 5174 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||||||||| |||||||| | ||| || || | ||| ||||| ||||| ||||| Sbjct 5173 GGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGAGGCAAACGAGCCCGAGAAAAAGATG 5114 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA-AA 127698 ||||| || || || || | || ||||| | || ||| | | |||| | | Sbjct 5113 CCCTCGACGGCGGCAAAGGCGACCAGGCGCTCCGAGAACGAG-GCGCGCTTGTCCGAGAT 5055 Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGA-TACATGGGACGGTCTGGATCGCTTCAA 127757 ||| || ||||||| ||||| | || || ||| |||| ||||| ||| || | || Sbjct 5054 CCAGCGCAAGGCCCACTCGGCCTTCTGCTTGACGACA-GGGATGGTCTCGATGGCGTTAA 4996 Query 127758 AGAG 127761 |||| Sbjct 4995 AGAG 4992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505443835640