Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq14 154 2e-32 seq8 149 1e-30 >seq14 Length=25249 Score = 154 bits (170), Expect = 2e-32 Identities = 472/714 (66%), Gaps = 12/714 (2%) Strand=Plus/Minus Query 203841 TGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGG 203900 ||||||| |||||||| || || | | | ||||| | | | || |||||| ||| | Sbjct 8116 TGTCCACGGTGAACTGGATCGCCTGCGCAGCAGGACGCGTGCGCAAGTAGTACGAGCCCG 8057 Query 203901 TCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGT 203960 |||| |||||||||| ||| ||||| | |||||| || | || | | | | | || Sbjct 8056 TCTTGAGGCCCTTCTTCCAGCCGTAAAAGTGCATCGACGTAAGCTGACCAAAGGTCGGCG 7997 Query 203961 CGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCC 204019 || || ||||||||| || ||||| ||| | ||| ||||| || || || ||| Sbjct 7996 CGCTCAGGTGAATGTTGAGGCTTTGGCTCTGGCACAC-AAACGCGCCACGGTCCGCAGCC 7938 Query 204020 ATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGT 204079 || | ||||| ||| || ||||||||||||||||||| | | | | || |||| Sbjct 7937 ATGTCAATAATCACCTTTTGGCTAATCTCCCACACCGTCTTGTAGAGGGCCTTGATGTGG 7878 Query 204080 TGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCAT-CCTCG 204137 | || | | | | || || |||||||||| || || || | ||| | | || Sbjct 7877 T-CGGGAATGCCAGCAATGTTCTGGATCGAGCCGCCGTGCGCAAT-AATCTTTTGCTTCA 7820 Query 204138 TCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCT 204197 || || ||| | |||| | || ||||| |||| ||| ||||||| | || Sbjct 7819 TCGAGTCGTTCCAGAGACCCAGCTCGACAAGCTCGCGCAGCAGCCACGGGTTGACCACCT 7760 Query 204198 GAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCT 204257 | || || || | ||| || | || || | | |||| | ||| | || || || || Sbjct 7759 GGAACTCGCCCGCCAGTACACGGCGCATGTAAATGTTGCTCGTGTACGGCTCAAAGCACT 7700 Query 204258 CGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGT 204317 ||||| ||||| ||||| ||| |||||| ||||| || |||| ||||| |||| Sbjct 7699 CGTTGAAGCCGAGGATCTGGCTCGTGGAGGCCGTCGGCATCGGCGCCATCAGCAGCGAGT 7640 Query 204318 TGCGCACACCGTATTTTTGGACCCTGCG-CTTCAGAGAGGTCCAGTCGTGCATCGCACTG 204376 | |||| ||||| | | | ||||| ||| || | || |||||| || | | Sbjct 7639 TCCGCAGACCGT-GCTGGGCAATCTGCGCCTTGAGCGTGGCCCAGTCCCACAGGTCCGTC 7581 Query 204377 GGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTAC 204436 || | ||||| |||| |||| | || ||| || | | |||||||||| |||| Sbjct 7580 GGCGGGCGGTTCCACAGGTCGTACTGCAGGAGGCCCTGCGAGGCGGGGCTGCCCTCGTAC 7521 Query 204437 GTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCG-GCCATGGCGTGATAGTA 204495 ||| || || || || | ||||||| ||| | ||| ||| ||| || ||| Sbjct 7520 GTCTCGTACGGGCCATATTCGGCAGCCAGCTCGCA-GCTGCGCTCCAGGGCCGCATGGTA 7462 Query 204496 CATGGTCTCAAAGATCTGAACGTTTAATCTGGCG-GCCTCCGTTCCGTCAAACG 204548 |||||||| ||||| || ||| || | | |||| |||||| | ||| |||| Sbjct 7461 GATGGTCTCGAAGATTTGCACG-TTCAGCAGGCGCGCCTCCTGGCTGTCGAACG 7409 Score = 84.2 bits (92), Expect = 3e-11 Identities = 322/500 (64%), Gaps = 8/500 (2%) Strand=Plus/Minus Query 205264 GTCGGCGTGCCACGGCTCTAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTG 205323 ||| | |||||||||||| | | | ||| | || || || | |||||| |||||||| Sbjct 6768 GTCCGAGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTG 6709 Query 205324 GTCCACCATGCGAGTCATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGT 205383 |||||| ||| | | |||| | || || ||||| ||||| | ||||||| Sbjct 6708 GTCCACGTAGCGCGCTGTGTTGTTGTATACGCGGAGCATGGGCACAATACCGTTGCTCAC 6649 Query 205384 CCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAAT 205443 || ||||| | | ||| |||||| || | | |||| ||| | ||||| Sbjct 6648 GCCATTCGTACCGGCAATGTACGAGCCCGTTGCACGGATGTTGTGGATATTCAGACCAAT 6589 Query 205444 CCCGCCAGAACACTTGGCGATCTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGA 205502 || || | |||| |||| |||||| ||||| || ||| |||||| || ||| Sbjct 6588 ACCACCGGCCGTCTTGCTGATCATCGCGCACGTCTTG-AGCGTGTCGTAGATACCCTCGA 6530 Query 205503 TGGAATCGTCCGCCAGTGTCACCAGATAGCACGAAGCCAGCTTGGCAAAGTTG---GTGC 205559 | || |||||| || |||| || |||| || | || |||| |||| |||| Sbjct 6529 TAGAGTCGTCCTTCATGCTCACAAGGAAGCAGGACGACA-TTTGG--GGGTTGGGCGTGC 6473 Query 205560 CCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAGCGCTTCTCGCTCAAACACCTGTAGG 205619 | || | ||| || || || ||||| | ||| ||||||| || | |||| | Sbjct 6472 CAGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTCGGACATGTAGTTGTATG 6413 Query 205620 TCTCCAGCACGCTCTCCAGATCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGT 205679 |||| | |||||| || ||| |||||| || || | |||| | ||||| | || Sbjct 6412 TCTCAATGGCGCTCTTCACATCCTCGCCGTGGATGCCCACAGCGACACGCATGAGCATGT 6353 Query 205680 GTTGAGGTCTCTCCATCACCCTCTCGTTCACCTTGAGCAGATAGGCTCTCTCTAGGGTGC 205739 | || || | |||| ||| | | || | ||||| |||| | ||| || || Sbjct 6352 GCTGGGGGCGCTCCGCGACCTTGCCATTGATGCGCAGCAGGTAGGAGCGCTCCAGCGTCT 6293 Query 205740 GGATGGCAAAAAAGTTGAAG 205759 || | | ||||||||| || Sbjct 6292 TGAAGCCGAAAAAGTTGTAG 6273 >seq8 Length=40485 Score = 149 bits (164), Expect = 1e-30 Identities = 354/522 (68%), Gaps = 21/522 (4%) Strand=Plus/Minus Query 159652 CTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTTCTT 159711 |||||||||||| | |||||||| | || || ||||| || | || |||||| Sbjct 5504 CTCGAAAAAGTTCGACTTGCCCTGGAGCGAAATGTTCTCCATAAAGTCAAAGGGGTTCGC 5445 Query 159712 CACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTCGAT 159771 | || ||| |||| || ||||| |||||| | ||| |||||||| || || Sbjct 5444 CGAGTTGTAGTGCTTGGGGTTGCCGAGGTTGACCAGCAGGCGGTCGGCCACAAACTCAAT 5385 Query 159772 GTAGCTACACATCTG-CTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGACA 159830 ||| ||||| | | | | ||| || || | |||| ||||| || || || | || Sbjct 5384 GTACTGGCACATGAGGCGCGC-GTTCATGCCGATCAGCGAGACGGGCAGGGCGTCGGTCA 5326 Query 159831 GAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACAC-GT-TCG---TA 159885 ||| |||| |||||| | || || ||||| | || ||| ||| || ||| | Sbjct 5325 AAAAGTCCTGCTCAATGGCCACGGCCTCGGTGATGAT--GCGGTTCACCGTGTCGGGGTG 5268 Query 159886 CCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 | | |||| || |||| | |||| |||||| ||||||||| |||||| || Sbjct 5267 CGCGCGCTTCTTCAG---GTGGC---TGAACAAGAGGCAGGCAAAGTCGGTGTGCAGACC 5214 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 |||||| || ||||||| |||||| || | ||||| ||||||| || ||| || Sbjct 5213 CTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCCAGGCATGAGACCGCGCTTCTT 5154 Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 ||||||||| |||| ||||| | || |||||||| ||||| ||||| ||||| || Sbjct 5153 GAGCCAAAAGATGGAGGCAAACGAGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGGC 5094 Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125 || || | ||| || |||||| |||| | |||| | |||||| || || Sbjct 5093 GACCAGGCGCTCCGAGAACGAGGCGCGCTTGTCCGAGATCCAGCGCAAGGCCCACTCGGC 5034 Query 160126 CTTCT--TTG-CGATGCACGGCATGCGCTCGACGGCGTTAAA 160164 ||||| ||| ||| || || ||| ||||| ||||||||| Sbjct 5033 CTTCTGCTTGACGA--CA-GGGATGGTCTCGATGGCGTTAAA 4995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795152923868240