Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq78 107 1e-17 >seq78 Length=277669 Score = 107 bits (118), Expect = 1e-17 Identities = 158/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143 || || |||| | || ||| | |||||| ||| |||||||||| || || || || Sbjct 143600 CCCTCCTCAATGGTCAGAAGCGACACATCAAAGGTACCACCACCCAGGTCGAAGATCAGG 143659 Query 518144 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 518203 || ||| | || |||| | || || || ||||| || |||| ||||||||||| || Sbjct 143660 ACGTTCTTCTCAGTGTCGTCCTTCTTGTCGAGACCGTAGGCAATGGCAGCAGCAGTGGGC 143719 Query 518204 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 518263 || ||||| || | || |||||| || || ||||| || || || || ||||| || Sbjct 143720 TCGTTAATGATACGCATAACATTCAGGCCGGCAATGACACCAGCGTCCTTGGTGGCCTGA 143779 Query 518264 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATC 518307 | || || ||||| || || || || ||||| | ||||| || Sbjct 143780 CGCTGCGAGTCGTTGAAGTAGGCCGGGACAGTGACCACGGCGTC 143823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780811036265674