Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq14 194 2e-44 seq8 113 6e-20 >seq14 Length=25249 Score = 194 bits (214), Expect = 2e-44 Identities = 696/1065 (65%), Gaps = 39/1065 (4%) Strand=Plus/Plus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| ||| ||||| ||||||| ||||| | || ||||| || || ||| | | | Sbjct 6345 CCCCCAGCACATGCTCATGCGTGTCGCTGTGGGCATCCACGGCGAGGATGTGAAGAGCGC 6404 Query 111671 TTTGGAGACATACGACAAGATGTCCCGT--GGTATGTTCATCCACGCAACACCAACCCTC 111728 | ||||||||| || | |||||| || | | || ||||| | || ||||| Sbjct 6405 CATTGAGACATACAACTACATGTCCGAGAAGGCCTTTACA--CACGCGTCGCCGACCCTG 6462 Query 111729 TTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAG 111788 ||||| ||||| || || | ||||||||||| || |||||| | | ||||| Sbjct 6463 TTCAATGCTGGCACGCCCAACCCCCAAATGTCGTCCTGCTTCCTTGTGAGCATGAAGGAC 6522 Query 111789 GATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAA--ATCTCAAAGTGGG 111846 || || ||| | || || |||| ||| |||| | |||| | | ||| ||| || Sbjct 6523 GACTCTATCGAGGGTATCTACGACACGCTCA--AGACGTGCGCGATGATCAGCAAGACGG 6580 Query 111847 CTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGT--ATTAGAGG 111904 | |||||||| || || | ||||| | || | | |||| | ||||| ||| || Sbjct 6581 CCGGTGGTATTGGTCTGAATATCCACAACATCCGTG-CAAC-GGGCTCGTACATTGCCGG 6638 Query 111905 TACAAATGG-TCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 111963 ||| ||||| | || | |||||| | || ||||| ||||||| ||| |||||||| Sbjct 6639 TACGAATGGCGTGAGCA-ACGGTATTGTGCCCATGCTCCGCGTATACAACAACACAGCGC 6697 Query 111964 GCTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGC 112017 |||| || |||| | ||| ||||| | || | | || |||| || |||| Sbjct 6698 GCTACGTGGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTTGCCATCTACCTGGAGC 6754 Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG 112077 | |||||| |||| | | |||||| |||| |||| ||||| ||| | ||||||| Sbjct 6755 CGTGGCACTCGGACGTGTTCGAGTTCATTGATCTGCGCAAAAACCACGGTAAGGAGGAGG 6814 Query 112078 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 112137 ||| ||||| || ||| || || |||||||| || | |||||| | || | Sbjct 6815 TGCGCGCGCGCGACCTGTTCCTGGCGCTGTGGATTCCTGACTTGTTCATGCGCCGCGTCG 6874 Query 112138 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA-TGCC 112196 || ||| ||| | ||||| || | || || | | || ||||| || |||| ||| Sbjct 6875 AGCAGAACGGCGACTGGTCGCTGATGTGCCCCGCCGAGTGCCCCGGCCTGGCCGACTGCT 6934 Query 112197 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG 112256 | || || || ||||| || |||||| || |||||| || | || || | ||| Sbjct 6935 AT-GGCGAAGAATTTGATGCTCTCTACGAGAAATACGAGCGCGAGGGCCGCGCCA-AGCG 6992 Query 112257 -ACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 112314 | || | || || || | ||||| | || |||||| || | || | |||||| || | Sbjct 6993 CTCTGT-CAAGGCGCAGAAGCTGTGGTATGCCATTCTCGAGGCACAGATCGAGACGGGCA 7051 Query 112315 CACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 112374 || | | || ||||| ||| | |||| ||||| || || ||||| |||| Sbjct 7052 ACCCCTTCGTCCTGTACAAGGACTCGGCGAACCGCAAGAGCAACCAGAAGAACCTGGGCA 7111 Query 112375 TGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAG--ACAAAGATGAGAC 112432 ||||||||| || ||||| || || || || | || ||||| || ||||| Sbjct 7112 CGATCAAGAGCTCGAACCTGTGCACGGAGATTATCGA--GTACAGCTCGCCGGACGAGAC 7169 Query 112433 GGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGT--AT--GTGGATCCAGAG--AC 112486 ||||||||| ||||| || || || || || || | || || || || | | | Sbjct 7170 GGCTGTGTGCAACCTGGCGTCGATTGCGCTGCCGACGTTCATCGAGGGCACCGGCGCCTC 7229 Query 112487 AAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAA 112546 ||||| | | | | || || || || |||| || || ||||| || Sbjct 7230 GAAGACGTACAACTTCCAGCGCCTGCATGACGTGTCGAAGGTGGTGTGCAAGAACCTGAA 7289 Query 112547 CAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACA 112606 | | | || || | || | |||||||| |||| || || || || ||| | || Sbjct 7290 CCGCATCATCGACATCAACTACTACCCCGTGGAGAGCGCGCGCCGCTCGAACATGCGTCA 7349 Query 112607 CCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT 112651 ||| || |||||| |||||||||| ||||| || |||| ||||| Sbjct 7350 CCGGCCCATTGGTATCGGTGTCCAGGGTCTTGCCGATGCGTTCAT 7394 >seq8 Length=40485 Score = 113 bits (124), Expect = 6e-20 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 102180 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCT 102239 ||||| || |||| ||||| || ||||| ||||| ||||| || || || | | Sbjct 5082 GAGCGCCTGGTCGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCC 5141 Query 102240 ATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 102299 || | ||||||||||||||| ||||||||||| || || | ||||| |||||||| ||| Sbjct 5142 ATCTTTTGGCTCAAGAAGCGCGGTCTCATGCCTGGCCTGTCGTTCTCGAACGAGCTCATC 5201 Query 102300 TCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 || ||||||||||| || ||| || ||||| Sbjct 5202 TCGCGTGACGAGGGTCTGCACACCGACTTTGC 5233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620740623124880