Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq14 284 1e-71 >seq14 Length=25249 Score = 284 bits (314), Expect = 1e-71 Identities = 1048/1622 (65%), Gaps = 51/1622 (3%) Strand=Plus/Minus Query 109531 CCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGTAC 109590 ||||| || || |||||||| || || |||||||||||| ||||| || |||||||| Sbjct 7952 CCACGGTCCGCAGCCATGTCAATAATCACCTTTTGGCTAATCTCCCACACCGTCTTGTAG 7893 Query 109591 AAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTCACC 109650 | |||||| | ||||||||| | | ||||| || || ||||| || | | Sbjct 7892 AGGGCCTTGATGTGGTCGGGAATGCCAGCAATGTTCTGGATCGAGCCGCCGTGCGCAATA 7833 Query 109651 ATGAGATCCTTCATC---TCTTTCGACCAGAGACCGACCTTTTTGAGATCGTCAACAAGA 109707 || | ||||||| || ||| |||||||| | || || ||| | || Sbjct 7832 ATCTTTTGCTTCATCGAGTCGTTC---CAGAGACCCAGCTCGACAAGCTCGCGCAGCAGC 7776 Query 109708 TGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTG 109767 | ||||||||| || || || || ||| || || | ||| ||||| ||||| Sbjct 7775 CACGGGTTGACCACCTGGAACTCGCCCGCCAGTACACGGCGCATGTAAATGTTGCTCGTG 7716 Query 109768 TAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGA 109827 || || || || ||||| ||| ||| ||||| || ||||| || || ||||| || Sbjct 7715 TACGGCTCAAAGCACTCGTTGAAGCCGAGGATCTGGCTCGTGGAGGCCGTCGGCATCGGC 7656 Query 109828 GCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTG--CGT--C 109883 ||||| || || ||| || ||||| | | | | || || ||| ||| | Sbjct 7655 GCCATCAGCAGCGAGTTCCGCAGACCGTGCTGGGCAATCTGC----GCCTTGAGCGTGGC 7600 Query 109884 CCAATCATA-ACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACAC 109942 ||| || | | | || | | | | | ||||| || || || | | Sbjct 7599 CCAGTCCCACAGGTCCG-------TCGGCGGGCGGTTCCACAGGTCGTACTGCAGGAGGC 7547 Query 109943 CCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGG 110002 ||| | || || |||| | | ||||||||| || | | | |||| |||| Sbjct 7546 CCTGCGAGGCGGGGCTGCCCTCGTACGTCTCGTACGGGCCATATTCGGCAGCCAGCTCGC 7487 Query 110003 ATGAAGC-CTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGA 110061 | | || ||| || |||||||| || || ||||| || || || | |||| ||||| Sbjct 7486 A-GCTGCGCTCCAGGGCCGCATGGTAGATGGTCTCGAAGATTTGCACGTTCAGCAGGCGC 7428 Query 110062 GACTCTTCACAGTCGAAGGGA-AGACCACAAAGAATAAACACATCCGCTAGACCCTGAAC 110120 | ||| | | |||||| ||| || ||| | | | ||| |||| || |||||||| || Sbjct 7427 GCCTCCTGGCTGTCGAACGGATAGCCCATGATCA-TGAACGCATCGGCAAGACCCTGGAC 7369 Query 110121 ACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAA 110180 ||||| ||||||||| || || |||||| ||||| || || | || |||||||| | Sbjct 7368 ACCGATACCAATGGGCCGGTGACGCATGTTCGAGCGGCGCGCGCTCTCCACGGGGTAGTA 7309 Query 110181 GTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTT 110240 |||| |||||||| || || || ||||| ||| ||||| | ||||| || Sbjct 7308 GTTGATGTCGATGATGCGGTTCAGGTTCTTGCACACCACCTTCGACACGTCATGCAGGCG 7249 Query 110241 GTCGTAATCGAACGTTTTCG---------TCTCCTTATTGACATATTTGGGGAGAGCAAT 110291 | | | | | |||| |||| | ||| ||| | | || || ||||| Sbjct 7248 CTGGAAGTTGTACGTCTTCGAGGCGCCGGTGCCCTCGATGA---ACGTCGGCAGCGCAAT 7192 Query 110292 AGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACA 110351 ||||| || |||||||||| |||||||| | |||| || | ||| ||||| || Sbjct 7191 CGACGCCAGGTTGCACACAGCCGTCTCGTCCGGCGAGCTGTACTCGATAATCTCCGTGCA 7132 Query 110352 CAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATC 110411 || ||| || ||||| || |||| ||||||||| || ||| ||| | || Sbjct 7131 CAGGTTCGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTCGCCGAGTC 7072 Query 110412 CTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA- 110470 ||| || || | | | ||| | || || || |||||| || ||||||||| | ||| | Sbjct 7071 CTTGTACAGGACGAAGGGGTTGCCCGTCTCGATCTGTGCCTCGAGAATGGCATACCACAG 7012 Query 110471 CATCGGCGGCGGGGACAGTTGCG-TTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAG 110529 | || ||| | | |||| ||| || ||| | || || |||||| || ||| | Sbjct 7011 CTTCTGCGCCTTG-ACAGA-GCGCTTGGCGCGGCCCTCGCGCTCGTATTTCTCGTAGAGA 6954 Query 110530 TCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGG 110589 | |||||||| | || || || | || || || | |||| || | || Sbjct 6953 GCATCAAATTCTTCGCCATAGCAGTCGGCCAGGCCGGGGCACTCGGCGGGGCACATCAGC 6894 Query 110590 GACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAG 110649 ||||| | || || ||| || | |||||||| |||||||||||||| |||| | Sbjct 6893 GACCAGTCGCCGTTCTGCTCGACGCGGCGCATGAACAAGTCAGGAATCCACAGCGCCAGG 6834 Query 110650 AAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCC 110709 || ||||| || || |||| || | ||| ||||| ||| || || | || || Sbjct 6833 AACAGGTCGCGCGCGCGCACCTCCTCCTTACCGTGGTTTTTGCGCAGATCAATGAACTCG 6774 Query 110710 ATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACGA---CCC 110766 | | ||||||||||| || || || |||| || | || || ||| || Sbjct 6773 AACACGTCCGAGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCA 6714 Query 110767 GCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCG 110826 |||||| || ||||| |||||| ||| | || | |||||| || | ||| || | | Sbjct 6713 CCCTGGTCCACGTAGCGCGCTGTGTTGTTGTATACGCGGAGCATGGGCACAATACCGTTG 6654 Query 110827 GATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATA 110886 ||||| ||||| ||| || | ||||| |||| |||||||| || | Sbjct 6653 CTCACGCCATTCGTACCGGCAATGTACGAGCCCGTTGCACGGATGTTGTGGATATTCAGA 6594 Query 110887 CCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGAGTGTACCATAAATACC 110945 ||||||||||| ||| ||| || || || ||| ||| |||| || | || ||||| Sbjct 6593 CCAATACCACCGGCCGTCTTGCTGATCATCGCGCACGTCT-TGAGCGTGTCGTAGATACC 6535 Query 110946 ATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGT 111005 || || || || |||| || | || ||||| || ||||| || || ||||| Sbjct 6534 CTCGATAGAGTCGTCCTTCATGCTCACAAGGAAGCAGGACGACATTTGGGGGTTGGGCGT 6475 Query 111006 TCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCT--TGGGACATCTTGTTG 111063 || |||||||| || || || | ||| || || | || ||| | |||||| | |||| Sbjct 6474 GCCAGCATTGAACAGGGTCGGCGACGCGTG--TGTAAAGGCCTTCTCGGACATGTAGTTG 6417 Query 111064 TATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAAC 111123 ||||| || | ||| ||||| | ||||| || || | || || ||||||| | Sbjct 6416 TATGTCTCAATGGCGCTCTTCACATCCTCGCCGTGGATGCCCACAGCGACACGCATGAGC 6357 Query 111124 AT 111125 || Sbjct 6356 AT 6355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974314056200