Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq14 239 5e-58 seq8 96.9 4e-15 >seq14 Length=25249 Score = 239 bits (264), Expect = 5e-58 Identities = 694/1056 (66%), Gaps = 37/1056 (4%) Strand=Plus/Minus Query 106278 CATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCG 106337 |||| || ||||| || ||||| | |||||| || | ||| ||||| || || |||| Sbjct 7387 CATCGGCAAGACCCTGGACACCGATACCAATGGGCCGGTGACGCATGTTCGAGCGGCGCG 7328 Query 106338 CAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCT 106397 | |||| ||||| || | || |||| |||| ||||| || || ||| || | || Sbjct 7327 CGCTCTCCACGGGGTAGTAGTTGATGTCGATGATGCGGTTCAGGTTCTTGCACACCACCT 7268 Query 106398 TTGTGATTTCATG----------AAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTG 106447 | | | ||||| ||||| | | | || | | || || | || || Sbjct 7267 TCGACACGTCATGCAGGCGCTGGAAGTTGTACGTCTTCGAG-GCGCCGGTGCCCTCGATG 7209 Query 106448 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 106507 | || | || || || || || |||| ||||| ||||||||||| ||| || Sbjct 7208 A---ACGTCGGCAGCGCAATCGACGCCAGGTTGCACACAGCCGTCTCGTCCGGCGAGCTG 7152 Query 106508 TACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 106567 ||||| | ||| || || |||| ||| || ||||| ||||| |||| ||||| ||||| Sbjct 7151 TACTCGATAATCTCCGTGCACAGGTTCGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTG 7092 Query 106568 CTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGAC 106627 ||||| ||| || |||||||| || | | |||| | |||||||| |||||| | Sbjct 7091 CTCTTGCGGTTCGCCGAGTCCTTGTACAGGACGAAGGGGTTGCCCGTCTCGATCTGTGCC 7032 Query 106628 TTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGC 106686 | |||||| || | ||||| | || ||| || | ||| | ||||| || ||||| Sbjct 7031 TCGAGAATGGCATACCACAGCTTCTGCGCCTTG-ACAGAGCGCTTGGCGCGGCCCTCGCG 6973 Query 106687 CTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTG 106745 |||||| || |||||| || ||||| || || ||| || ||||| || || || Sbjct 6972 CTCGTATTTCTCGTAGAGAGCATCAAATTCTTC-GCCATAGCAGTCGGCCAGGCCGGGGC 6914 Query 106746 CCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGT 106805 || | | || || | || ||||| | || || ||| || || |||||| | || Sbjct 6913 ACTCGGCGGGGCACATCAGCGACCAGTCGCCGTTCTGCTCGACGCGGCGCATGAACAAGT 6854 Query 106806 CTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGA 106865 | ||||||||||| | || || || | || |||| || | ||| ||||| Sbjct 6853 CAGGAATCCACAGCGCCAGGAACAGGTCGCGCGCGCGCACCTCCTCCTTACCGTGGTTTT 6794 Query 106866 GTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAG 106925 || | |||| |||||| | | |||| |||||| ||||| || |||| || | | Sbjct 6793 TGCGCAGATCAATGAACTCGAACACGTCCGAGTGCCACGGCTCCAGGTAGATGGCAAAGG 6734 Query 106926 ATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGC 106979 || ||||| ||| | || | || |||||||||||| ||| |||||| Sbjct 6733 CACC---GGGACGCTTGTTGCCACCCTGGTCCACGTAGCGCGCTGTGTTGTTGTATACGC 6677 Query 106980 GAAGCATTGGAATAATACCATCTGAT-TGACCATTTGTCCCCCGAA--TACGAGATTTAT 107036 | ||||| || | |||||| | || | ||||| || || || |||||| Sbjct 6676 GGAGCATGGGCACAATACCGT-TGCTCACGCCATTCGTACCGGCAATGTACGAG--CCCG 6620 Query 107037 TGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCAC 107096 | || | | | ||||| | || |||||||| || ||| ||| ||| ||| | Sbjct 6619 TTGCACGGATGTTGTGGATATTCAGACCAATACCACCGGCCGTCTTGCTGATCATCGCGC 6560 Query 107097 ACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGC 107156 || | | || || | |||||||| | ||| ||||| ||||| || | |||||||| Sbjct 6559 ACGTCTTGAGCGTGTCGTAGATACCCTCGATAGAGTCGTCCTTCATGCTCACAAGGAAGC 6500 Query 107157 AACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGA 107216 | ||||| || || | || || ||||||||||| ||||| || | ||||| || Sbjct 6499 AGGACGACATTTGGGGGTTGGGCGTGCCAGCATTGAACAGGGTCGGCGACGCGTG--TGT 6442 Query 107217 ACATACCT--TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTG 107274 | | ||| | |||||| | || ||||||||| | | | | | || || ||||| Sbjct 6441 AAAGGCCTTCTCGGACATGTAGTTGTATGTCTCAATGGCGCTCTTCACATCCTCGCCGTG 6382 Query 107275 GATGCCGATGGCCACACGCATAAACATGTATTGGGG 107310 |||||| | || |||||||| | ||||| ||||| Sbjct 6381 GATGCCCACAGCGACACGCATGAGCATGTGCTGGGG 6346 >seq8 Length=40485 Score = 96.9 bits (106), Expect = 4e-15 Identities = 119/163 (73%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || ||| |||||||| || || || || || || || ||||| | ||||| Sbjct 5234 GGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCC 5175 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 ||||||||||| |||||||| | |||| | || | | || || || ||||| ||||| Sbjct 5174 AGGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGAGGCAAACGAGCCCGAGAAAAAGAT 5115 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAG 117435 ||||| || ||||| || | |||||||| | ||| ||| Sbjct 5114 GCCCTCGACGGCGGCAAAGGCGACCAGGCGCTCCGAGAACGAG 5072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979111179960