Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq102 149 1e-30 seq27 143 6e-29 seq105 138 3e-27 >seq102 Length=51898 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || ||| ||| || || || ||||| ||| ||||| | ||||| || Sbjct 9005 ACGAGATGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCC 8946 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| || ||||| || || |||||||| |||||||| || || ||||| ||| Sbjct 8945 AGCTGCTTACCAGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGA 8886 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || || |||||||| |||||| || ||||||| |||||| Sbjct 8885 ATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGATTCCACCTCGAGGGTAATCGTCTTG 8826 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || | || ||||| || | ||||||| Sbjct 8825 CCAGTGAGGGTCTTTACAAAAATTTGCATT 8796 Score = 140 bits (154), Expect = 7e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 194949 CTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAA 195008 ||| || || || ||||| ||| ||||| | ||||| || ||||||||||| || || Sbjct 9216 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCCAGCTGCTTACCAGCAAA 9157 Query 195009 GATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTT 195068 ||| || || |||||||| ||||||||||| || ||||| ||||| || |||||| || Sbjct 9156 GATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATT 9097 Query 195069 CTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTAC 195128 ||||| |||||||| |||||| || |||| || |||||| || || | || || || Sbjct 9096 GTCAATCGTGTCCGACGATTCCACCTCGAGGGGAATCGTCTTGCCAGTGAGGGTCTTGAC 9037 Query 195129 GAACACTTGCAT 195140 ||| | ||||| Sbjct 9036 GAAGATCTGCAT 9025 >seq27 Length=62815 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || ||| ||| || || || ||||| ||| || || | || || ||| Sbjct 52882 ACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCCTCG 52941 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| ||||| || || || |||||||| ||||||||||| || || || || Sbjct 52942 AGCTGCTTACCAGCGAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTATCCTGG 53001 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || || ||||||||| || || |||||||| | |||||| Sbjct 53002 ATCTTGGCCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTCTTG 53061 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| ||| || ||||| | |||||| Sbjct 53062 CCAGTCAGAGTCTTGACGAAGATTTGCAT 53090 >seq105 Length=229645 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || ||| ||| || || || ||||| ||| || || | ||||| || Sbjct 227294 ACGAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCCTCC 227235 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || |||||||| || || || || || ||||| || Sbjct 227234 AGCTGCTTGCCCGCGAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGG 227175 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || ||||| || ||||| ||| ||||| |||||||| | |||||| Sbjct 227174 ATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 227115 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || |||||||||||||| Sbjct 227114 CCGGTCAGGGTCTTGACGAACACTTGCAT 227086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109478344711643