Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq14 260 3e-64 seq8 250 5e-61 >seq14 Length=25249 Score = 260 bits (288), Expect = 3e-64 Identities = 870/1324 (66%), Gaps = 41/1324 (3%) Strand=Plus/Minus Query 221360 GGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGC---CTGGGCGCAAGACTGC 221416 || || || ||||||| |||||| || || || |||||| | | |||| |||| Sbjct 7535 GGGCTGCCCTCGTACGTCTCGTACGGGCCATA---TTCGGCAGCCAGCTCGCAG--CTGC 7481 Query 221417 GT--CAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGG 221474 | |||||| || |||||||||||||| ||||| | ||| || ||||| Sbjct 7480 GCTCCAGGGCCGCATGGTAGATGGTCTCGAAGATTTGCACGTTCAGCAGGCGCGCCTCCT 7421 Query 221475 GAGAAGT-GAAGGGCATA-CGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGA 221531 | | || ||| || ||| | || ||| |||| | | ||||| || ||||| || |||| Sbjct 7420 G-GCTGTCGAACGG-ATAGCCCATGATCATGAACG-CATCGGCAAGACCCTGGACACCGA 7364 Query 221532 TACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGC-CGCT-TCTGGCACGGGATAAAAGTT 221589 |||| ||||||| ||| | | |||| || ||||| ||| ||| |||||| || |||| Sbjct 7363 TACCAATGGGCCGGTGACGCATGTTCGA-GCGGCGCGCGCTCTC-CACGGGGTAGTAGTT 7306 Query 221590 GACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTG 221649 || |||||| | ||| |||||| | || || ||| || ||| ||| Sbjct 7305 GATGTCGATGATGCGGTTCAGGTTCTTGCACACCACCTTCGACACGTCATGCAGGCGCTG 7246 Query 221650 GTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAAC 221709 | ||| || | | | ||||| ||| | | || || || |||| Sbjct 7245 GAAGTTGTACGTCTTCGAGGCGCCG--GTGCCCTCGATGAACGTCGGC----AGCGCAAT 7192 Query 221710 GCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACA 221769 |||||||| ||||| ||| ||||||| | | |||| || ||||| || || Sbjct 7191 CGACGCCAGGTTGCACACAGCCGTCTCGTCCGGCGAGCTGTACTCGATAATCTCCGTGCA 7132 Query 221770 GAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTC 221829 ||||| || |||||| || ||||||| || || || |||||| || || | ||| Sbjct 7131 CAGGTTCGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTCGCCGAGTC 7072 Query 221830 CTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAG 221889 |||||| || | ||||| ||| ||||| | ||| ||| | ||||| | ||| || Sbjct 7071 CTTGTACAGGACGAAGGGGTTGCCCGTCTCGATCTGTGCCTCGAGAATGGCATACCACAG 7012 Query 221890 TTCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGA 221948 | |||| || | || | | |||| | |||||| || | | | || || ||| Sbjct 7011 CT-TCTGCGCCTTGACAGAGCGCTTGGCGCGGCCCTCGCGCTCGTATTTCTCG-TAGAGA 6954 Query 221949 GCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCA 222008 |||| |||| | ||| || || ||| ||||||| || ||| |||||| ||||||| Sbjct 6953 GCAT--CAAATTCTTCGCCATAGCAGTCGGCCAGGCCGGGGCACTCGGCGGGGCACATCA 6896 Query 222009 GACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCT 222068 | ||||| ||| | | ||| | ||||||| | ||| || |||||||||||| Sbjct 6895 GCGACCAGTCGCCGTTCTGCTCGACGCGGCGCATGAACAAGTCAGGAATCCACAGCGCCA 6836 Query 222069 GAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACT 222128 | || || || | | ||| ||||||| |||| |||||| | |||||| | |||| Sbjct 6835 GGAACAGGTCGCGCGCGCGCACCTCCTCCTTACCGTGGTTTTTGCGCAGATCAATGAACT 6776 Query 222129 CAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGC 222188 | || | ||| | ||||||||||||||| |||| ||| | || ||||| |||||||||| Sbjct 6775 CGAACACGTCCGAGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGC 6716 Query 222189 CACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGT 222248 ||||||| ||||| | | | |||| | | ||| || | || || | |||| Sbjct 6715 CACCCTGGTCCACGTAGCGCGCTGTGTTGTTGTATACGCGGAGCATGGGCACAATACCGT 6656 Query 222249 TGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACA 222308 || || || || || |||||||| || || | | ||| | | || Sbjct 6655 TGCTCACGCCATTCGTACCGGCAATGTACGAGCCCGTTGCACGGATGTTGTGGATATTCA 6596 Query 222309 TGCCGATACCACCGG-CGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATG 222367 || |||||||||| ||| || | |||||| ||||| ||||||| ||||| ||| Sbjct 6595 GACCAATACCACCGGCCGTCTTGC-TGATCATCGCGCACGTCTTGAGCGTGTCGTAGATA 6537 Query 222368 CCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTG 222427 ||||| |||||||| ||||| | | ||| || || || |||||||| || | |||| Sbjct 6536 CCCTCGATAGAGTCGTCCTTCATGCTCACAAGGAAGCAGGACGACATTTGGGGGTTGGGC 6477 Query 222428 GAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCC--CCTAGACATCAGAT 222485 | | || || ||||| || || |||||||||||| ||| | ||||| | Sbjct 6476 GTGCCAGCATTGAACAGGGTCGGCGACGCGTGTGTAAAG--GCCTTCTCGGACATGTAGT 6419 Query 222486 CGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGT 222545 ||| ||||| | | | || | | || ||||| || || ||| | |||| Sbjct 6418 TGTATGTCTCAATGGCGCTCTTCACATCCTCGCCGTGGATGCCCACAGCGACACGCATGA 6359 Query 222546 ACATGTACTGGGGCCTCTCCACAGGACCCTTGGA--GCTGGAGAGCAGGTACGATTTTTC 222603 ||||| |||||| | |||| | |||| | | | || |||||||| || || Sbjct 6358 GCATGTGCTGGGGGCGCTCCGC--GACCTTGCCATTGATGCGCAGCAGGTAGGAGCGCTC 6301 Query 222604 CAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTC 222663 ||| |||||||| || || ||||| || |||||| | ||| || || || | ||| Sbjct 6300 CAGCGTCTTGAAGCCGAAAAAGTTGTAGTGAAAGTCGCGCTCGTAAATGACCGCCGAGTC 6241 Query 222664 CAGC 222667 ||| Sbjct 6240 GAGC 6237 >seq8 Length=40485 Score = 250 bits (276), Expect = 5e-61 Identities = 556/837 (66%), Gaps = 20/837 (2%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| |||||||||||||||| | || |||||||||||| ||||| || Sbjct 4677 GAGATCTGGCAGATGTACAAGAAGGCCGAGGCGTCGTTCTGGACCGCCGAGGAGATGGAC 4736 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGAC---GAGCAGCATTTTCTC 25590 ||| | |||||| || ||| |||| || | || ||| |||| || ||| | Sbjct 4737 CTGTCGAAGGACCTGCACGACTGGGACCACCGCATGAACGACAATGAGCGCCACTTTGTA 4796 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 | | || |||| |||||||| ||||| || || || || |||||||| ||| ||| Sbjct 4797 AGCCATGTCCTGGCCTTCTTTGCTGCCTCAGACGGCATCGTCAACGAGAACCTGGTGGAG 4856 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | |||| | || |||||| || |||||| || |||||||| || ||||| Sbjct 4857 CGCTTCAGCGCCGAGGTGCAGGCCGCTGAGGCCCGCTGCTTCTACGGCTTTCAGATTATG 4916 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGAC 25767 || || || | ||||| ||| ||| | ||| || || |||||||| || Sbjct 4917 ATGGAGAACATCCACTCGGAGACGTACTC---GCTCCTCATTGACACGTACATCCGTGA- 4972 Query 25768 GTCGCCG-AGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAA 25826 |||| | || | || || ||| ||||||||| ||| || | ||||| ||| Sbjct 4973 GTCGGAGCAGCGCGAATACCTCTTTAACGCCATCGAGACCATCCCTGTCGTCAAGCAGAA 5032 Query 25827 GGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGT 25886 ||| ||||||| || |||||| | || |||| |||| ||||| ||||| Sbjct 5033 GGCCGAGTGGGCCTTGCGCTGGATCTCGGACAAGCGCGCCTCGTTCTCGGAGCGCCTGGT 5092 Query 25887 AGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT 25946 |||||||| || || ||||||||||||||| || |||||||| ||||||| ||||| Sbjct 5093 CGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCCATCTTTTGGCT 5152 Query 25947 CAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGA 26006 |||| || || |||||| || |||| || || |||||||||||| | ||||| Sbjct 5153 CAAGAAGCGCGGTCTCATGCCTGGCCTGTCGTTCTCGAACGAGCTCATCTCGCGTGACGA 5212 Query 26007 GGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTC 26066 |||||| |||| || ||||||||||| | | || ||||| || | || | | Sbjct 5213 GGGTCTGCACACCGACTTTGCCTGCCTCTTGTTCA---GCCAC---CTGAAGAAGCGCGC 5266 Query 26067 TCA---AGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCN 26123 || || || || || | ||||||| ||||| |||| || ||| |||| ||| Sbjct 5267 GCACCCCGACACGGTGAACCGCATCATCACCGAGGCCGTGGCCATTGAGCAGGACTTTTT 5326 Query 26124 NNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACAT 26183 | ||||||||| | |||||| |||| ||||| Sbjct 5327 GACCGACGCCCTGCCCGTCTCGCTGATCGGCATGAACGCGCGCCTCATGTGCCAGTACAT 5386 Query 26184 TGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCC 26243 ||||| ||||||||||| |||||| | | || || | ||| | ||||| || | Sbjct 5387 TGAGTTTGTGGCCGACCGCCTGCTGGTCAACCTCGGCAACCCCAAGCACTACAACTCGGC 5446 Query 26244 TAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGA 26300 ||||| || ||||||||||| ||||| ||| | | || ||| | ||||| || || Sbjct 5447 GAACCCCTTTGACTTTATGGAGAACATTTCGCTCCAGGGCAAGTCGAACTTTTTCGA 5503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842141181760