Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq78 572 2e-158 seq102 172 7e-38 seq27 161 1e-34 seq213 141 1e-28 seq205 91.5 2e-13 >seq78 Length=277669 Score = 572 bits (634), Expect = 2e-158 Identities = 1078/1581 (68%), Gaps = 7/1581 (0%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 ||| ||||||| || || || || || ||||| ||||| | ||| ||||| || || ||| Sbjct 144228 GCTGTTGGTATTGACTTGGGTACCACCTACTCTTGTGTGGCTGTCTGGCAGAACGACCGT 144169 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||| | || | |||||||| || |||||||| ||||| |||||||||||||| || Sbjct 144168 GTTGAGGTCATTGCCAATGACCAGGGTAACCGTACGACTCCCTCGTACGTTGCCTTCACC 144109 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || | || ||||| | || || ||||| || || ||| || |||||||| ||| Sbjct 144108 GACACGGAGCGTCTGATCGGTGACGCCGCCAAGAACCAGGTGGCCATGAACCCCCACAAC 144049 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 |||||||||||||| |||||||| ||||| |||||||| || | ||||| Sbjct 144048 ACTGTCTTTGACGCCAAGCGTCTGATTGGCCGCAAGTTCAACGACGCTGAGGTCCAGTCG 143989 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTC-CCGGTGTGGCTGATAAGCCTATGATTAA 195597 || || ||| ||||| | | || || ||| | ||| |||||| | || Sbjct 143988 GACATGAAGCACTGGCCCTTCTCGGTCGTCGACCGCTCGGGC----AAGCCTGTCATCCG 143933 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 || || | | |||||| |||| || ||||||| ||||||||||| ||||| | Sbjct 143932 CGTCGAGTACAAGGGTGAGGAGAAGATCTTCACTCCCGAGGAAATTTCGTCGATGGTTCT 143873 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 | | |||||| ||||| || || | | | | || |||||| || || || || Sbjct 143872 GCTCAAGATGCGTGAGACCGCCGAGGCCTACCTTGGCTCGGATGTGAAGGACGCCGTGGT 143813 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 ||||| || || ||||||| || || || || ||||| || |||||||||| || || Sbjct 143812 CACTGTCCCGGCCTACTTCAACGACTCGCAGCGTCAGGCCACCAAGGACGCTGGTGTCAT 143753 Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 ||| || || || | | | || || || || || || || ||||| ||||| || || Sbjct 143752 TGCCGGCCTGAATGTTATGCGTATCATTAACGAGCCCACTGCTGCTGCCATTGCCTACGG 143693 Query 195838 TCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTAC 195897 ||| |||||||| | ||| || || || || ||||||| || || ||||||||||| Sbjct 143692 TCTCGACAAGAAGGACGACACTGAGAAGAACGTCCTGATCTTCGACCTGGGTGGTGGTAC 143633 Query 195898 GTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGG 195957 |||||||| || ||||| | ||||| | ||||| || || || ||||| || ||||| Sbjct 143632 CTTTGATGTGTCGCTTCTGACCATTGAGGAGGGTATCTTTGAGGTGAAGGCCACCGCTGG 143573 Query 195958 TGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTCTGATG 196016 ||| || || || |||||||| || || || || || || || || ||| | | Sbjct 143572 TGACACGCACCTTGGTGGTGAGGACTTTGACAACCGCCTCGTCAACCACTTCGTC-CAGG 143514 Query 196017 AGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTA 196076 ||||| || ||||| ||||| || | | || || | ||||| ||||| || Sbjct 143513 AGTTCAAGCGCAAGAACAAGAAGGACCTGACCACCAACGCTCGTGCTCTCCGTCGTCTCC 143454 Query 196077 GGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGA 196136 | ||||| | || |||||||| || ||||||||||| | ||||| || | | |||| Sbjct 143453 GCACTGCCTCGGAGCGTGCCAAGCGCACTCTCTCTTCGGCTGCTCAGACCACCATCGAGA 143394 Query 196137 TTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAG 196196 | || ||| |||| || || ||||||||||| || | || || ||||| || || || | Sbjct 143393 TCGACTCGCTGTTCGAGGGTATTGACTTCTACACCTCGATCACTCGTGCCCGCTTCGAGG 143334 Query 196197 AGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACG 196256 || | | ||| | || | | || || || || || | || || || |||| Sbjct 143333 AGCTCTGCGGTGACCTCTTCTCGCACACCATCGACCCCGTCGAGAAGGTGCTCCGCGACG 143274 Query 196257 CAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTC 196316 | ||||| || ||| | |||| | || |||||||| || || || || |||||||||| Sbjct 143273 CCAAGATCGACAAGGGTTCGGTTAACGAGATTGTCCTGGTCGGTGGTTCGACCCGTATTC 143214 Query 196317 CGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCA 196376 | | || || | || | ||||||||| || ||||| |||||| Sbjct 143213 CCCGTGTGCAGAAGCTCCTCCGTGACTTCTTCAACGGCCGCGAGCCCAACAAGTCGATCA 143154 Query 196377 ACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTG 196436 |||| || || || ||||| || ||||| || || |||||||| ||||| || |||| Sbjct 143153 ACCCCGACGAGGCTGTTGCCTACGGTGCTGCTGTCCAGGCTGCCATTCTGTCGGGTGACA 143094 Query 196437 ACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTG 196496 | | || || || || ||||| || || ||||| || | || ||||| | | Sbjct 143093 CCTCGGAGAAGACTCAGGACCTCCTGCTGCTCGACGTTGCCCCTCTGTCGATGGGTATCG 143034 Query 196497 AAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGA 196556 | || || |||||||| | || | ||| | | ||||| || | || || |||| Sbjct 143033 AGACTGCTGGTGGTGTCTTCACCCCCCTCATTAAGCGTAACACCACCGTGCCTACCAAGA 142974 Query 196557 AGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATG 196616 || | ||||| || || ||| |||| || || || ||||| | || || || | | Sbjct 142973 AGTCGGAGGTCTTCTCGACTTATGCCGACAACCAGCCCGGTGTGCTGATCCAGGTGTTCG 142914 Query 196617 AAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGA 196676 | || || || |||| | ||||| ||| | || || || | ||||| | |||| | Sbjct 142913 AGGGTGAGCGTGCCCGCACCAAGGACAACAACCTGCTCGGTAAGTTCGAGCTCTCGGGCA 142854 Query 196677 TTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATG 196736 |||| |||| || | ||||| || |||||| | ||| ||| || | ||||| || | Sbjct 142853 TTCCTCCTGCTCCTCGTGGTGTGCCCCAGATTGAGGTTACCTTTGACGTCGACGCCAACG 142794 Query 196737 GAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTA 196796 || || ||||| | |||| |||||| | |||| || || ||||| || | Sbjct 142793 CTATCCTGAACGTGTCGGCTGCCGACAAGACGACTGGTCGCTCGGAGAAGATCACCATCA 142734 Query 196797 CCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAA 196856 | || |||||||| || ||||| |||||||| ||||| || |||||| || || || | Sbjct 142733 CGAACGACAAGGGTCGTCTTTCGAAGGAGGACATTGAGCGCATGGTTGCCGACGCCGAGA 142674 Query 196857 AGTACAGGGAAGAAGACGAGG 196877 |||||| || || ||||||| Sbjct 142673 AGTACAAGGCTGAGGACGAGG 142653 >seq102 Length=51898 Score = 172 bits (190), Expect = 7e-38 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| ||||| || ||||| ||||| || || || ||||||||||| || ||||| Sbjct 8797 ATGCAAATTTTTGTAAAGACCCTCACTGGCAAGACGATTACCCTCGAGGTGGAATCGTCG 8856 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| ||||||||||| || ||||| || ||||| || || || Sbjct 8857 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAA 8916 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || ||||||||||| ||||| || ||||| ||||| || || |||||| Sbjct 8917 CAGCGTCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTGAGCGACTACAAC 8976 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || |||||| || || || || || || | || || |||||| Sbjct 8977 ATCCAGAAGGAGAGCACGCTGCATCTCGTGCTGCGTCTGCGTGGTGGT 9024 Score = 167 bits (184), Expect = 3e-36 Identities = 176/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || ||||| ||||| || || || |||||||||| || | Sbjct 9020 GTGGTATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACGATTCCCCTCGAGGTGGAAT 9079 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 |||| ||||| || || || |||| ||||||||||| || ||||| |||||||| || | Sbjct 9080 CGTCGGACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCTCCGG 9139 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | || || || || || ||||||||||| ||||| || ||||| ||||| || || | Sbjct 9140 ACCAACAGCGTCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTGAGCGACT 9199 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| | || |||||| ||| || || || || || | || || ||||| Sbjct 9200 ACAACATCCAGAAGGAGAGTACGCTGCATCTCGTGCTGCGCCTGCGTGGTGG 9251 >seq27 Length=62815 Score = 161 bits (178), Expect = 1e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| || || || || ||||| || || |||||||| ||||| ||||| || Sbjct 53090 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACCCTTGAGGTCGAGTCTTCG 53031 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| |||||||| || |||||||| |||||||| || || || Sbjct 53030 GACACGATCGACAATGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCTCCGGACCAA 52971 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| |||||||| ||||| || || || || ||||| || |||||| Sbjct 52970 CAGCGTCTGATTTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTGAGCGACTACAAC 52911 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||| || || ||||| || || Sbjct 52910 ATCCAGAAGGAGAGCACCCTGCACCTCGTGCT 52879 >seq213 Length=113772 Score = 141 bits (156), Expect = 1e-28 Identities = 450/690 (65%), Gaps = 11/690 (2%) Strand=Plus/Plus Query 195302 ATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTA 195361 || ||||| || || || || || ||||| ||||| ||||| || | | ||||| Sbjct 12269 ATCGGTATTGACTTGGGTACGACCTACTCGTGTGTGGGTGTGCAGCGTCAAGGCCGTGTC 12328 Query 195362 GAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA--- 195418 |||||||| | || ||||| || ||||||| ||||| || || || || || | Sbjct 12329 GAGATTATTGCCAACGACCAGGGTAACCGTATCACTCCCTCCTATGTCGCTTTCTCGAAG 12388 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 ||| | || |||||| |||| || ||||| || || ||| | || |||||| ||| Sbjct 12389 GATGACGAGCGTCTCATTGGTGACGCCGCGAAGAACCAGGCCGCCCAGAACCCCGACAAC 12448 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || |||||||||| |||||||| || |||||||||| || | || | | Sbjct 12449 ACGATCTTTGACGCCAAGCGTCTGATCGGTCGCAAGTGGGGCGAGGCTGACGTGAAGAAG 12508 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCT-GATAAGCCTATGATTAA 195597 || || ||| ||| | | | ||| | | || | | | ||||| || || Sbjct 12509 GACATGAAGCACTTCCCGT-TCAAGCTCGT---GGAGAAGAACGGCAAGCCGGCTATCAA 12564 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 || | | || || || || | || || || || | |||||| | Sbjct 12565 GGTGACCGTCCGTGGCCAGCCCAAGGTGTTCACGCCTGAGGAGATCAGCGCCATGGTGCT 12624 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 | |||||||||||||| || || | | | ||||| | | || | | || ||||| Sbjct 12625 GCAGAAGATGAAGGAGACCGCCGAGGCCTACCTGGGTCACAAGGTCACTCACGCCGTTGT 12684 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 |||||| || || ||||| | || | || || ||||| || ||||| || | | || Sbjct 12685 GACTGTGCCGGCCTACTTTAACGACGCGCAGCGTCAGGCCACCAAGGATGCCGGCACCAT 12744 Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 || ||||| | || | || | || || || || |||||||| ||||| || || Sbjct 12745 CGCCGGTCTCGAGGTCCTCCGTATCGTGAACGAGCCCACTGCGGCTGCCATTGCCTACGG 12804 Query 195838 TCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTAC 195897 |||||||||||| ||| || || | || || | | | || || ||||||||||| Sbjct 12805 TCTGGACAAGAAGGAGGGCG-AGTCGCAGAT-CATCG-TGTACGACCTGGGTGGTGGTAC 12861 Query 195898 GTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGG 195957 ||||||||||| || || | || || ||| | ||||| || ||||| ||||| Sbjct 12862 CTTTGATGTCTCGCTCCTGACCATCGACTCGGGTGTGTTCGAGGTGCTTGCTACGGCTGG 12921 Query 195958 TGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||| || || || |||||||| || || || Sbjct 12922 TGACACCCACCTGGGTGGTGAGGACTTTGA 12951 >seq205 Length=56843 Score = 91.5 bits (100), Expect = 2e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 195800 ATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAA 195859 || ||||| || || || || ||||| ||||| || ||||| ||| || | | | Sbjct 2341 ATCATCAACGAGCCCACCGCCGCTGCCATTGCGTACGGTCTCGACTCCAAGTCGAGCCAG 2400 Query 195860 GATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAAT 195919 || || || || | ||||| || || ||||||||||| |||||||| || || || || Sbjct 2401 GAGAAGAACGTGCTCATCTTCGACCTGGGTGGTGGTACCTTTGATGTGTCGCTGCTGAAC 2460 Query 195920 ATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAA 195979 || |||||| | || | || ||||| || || ||||| || || || |||||||| Sbjct 2461 ATCACGGGTGGTGTGTTTGCCGTCAAGGCCACCGCCGGTGACACGCACCTGGGTGGTGAG 2520 Query 195980 GATTTCGA 195987 || || || Sbjct 2521 GACTTTGA 2528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657860516868880