Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq105 111 1e-19 seq102 105 4e-18 seq27 105 4e-18 seq22 84.2 1e-11 >seq105 Length=229645 Score = 111 bits (122), Expect = 1e-19 Identities = 157/219 (72%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || ||||| | |||||||||||||| ||||| ||||| ||| |||| |||| Sbjct 227298 CAGCACGAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATC 227239 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || ||||||||||| || || ||||| | || | ||||||||||| Sbjct 227238 CTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTC 227179 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | || || || || || || |||| || | ||| || |||| ||| || Sbjct 227178 CTGGATCTTGGCCTTCAC--ATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATC 227121 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGATA 34981 ||||| || || |||||||| || || | |||||| || Sbjct 227120 GTCTTCCCGGTCAGGGTCTTGACGAACACTTGCATGGTA 227082 >seq102 Length=51898 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || || || | |||||||||||||| ||||| ||||| || | || |||| Sbjct 9009 CAGCACGAGATGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATC 8950 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || || |||||||| || || ||||| | || | ||||||||||| Sbjct 8949 CTCCAGCTGCTTACCAGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTC 8890 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | |||| || | || || || | ||| || || Sbjct 8889 CTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGATTCCACCTCGAGGGTAATCGT 8830 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || ||||||||||||||||| || ||||| Sbjct 8829 CTTGCCAGTGAGGGTCTTTACAAAAATTTGCAT 8797 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || || || | || ||||||||||| ||||| ||||| || | || |||| Sbjct 9237 CAGCACGAGATGCAGCGTACTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATC 9178 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || || |||||||| || || ||||| | || | ||||||||||| Sbjct 9177 CTCCAGCTGCTTACCAGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTC 9118 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || ||||| | |||| || | || || || | || || || Sbjct 9117 CTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGATTCCACCTCGAGGGGAATCGT 9058 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || ||||||||||| || ||||||||||| Sbjct 9057 CTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 9025 >seq27 Length=62815 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | ||||||||||||||| ||||| ||||| ||| |||| | || Sbjct 52879 AGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCC 52938 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || ||||| ||||| || || ||||| | || | |||||||| || Sbjct 52939 TCGAGCTGCTTACCAGCGAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTATCC 52998 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||||| | |||| || | |||||| |||| ||| || ||| Sbjct 52999 TGGATCTTGGCCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTC 53058 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || || ||||| || ||||| |||||| Sbjct 53059 TTGCCAGTCAGAGTCTTGACGAAGATTTGCATG 53091 >seq22 Length=101165 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || | ||| | |||||| ||||| | ||||||||||| || || || ||||| Sbjct 10440 CCACCGCGCAAACGCAGGACGAGGTGCAGCGTGCTCTCCTTTTGGATATTGTAGTCGCTC 10499 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | ||| |||| ||||| ||||| || || || ||||| || |||||||| |||| Sbjct 10500 AAAGTACGCCCATCCTCCAGCTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCCGGCGGA 10559 Query 34871 ACCCCCTCCTTGTC 34884 | ||||||||||| Sbjct 10560 ATGCCCTCCTTGTC 10573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691891011751