Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq8 185 8e-42 seq14 183 3e-41 seq102 95.1 1e-14 seq27 87.8 2e-12 >seq8 Length=40485 Score = 185 bits (204), Expect = 8e-42 Identities = 332/480 (69%), Gaps = 9/480 (2%) Strand=Plus/Plus Query 46776 AAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCCACGCTGGCCGAGCGCATG 46835 |||||| |||||||| || |||||| | | || |||| || | | |||||| || Sbjct 5031 AAGGCCGAGTGGGCCTTGCGCTGGATCTCGGACAAGCGCGCCTCGTTCTCGGAGCGCCTG 5090 Query 46836 GTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATTTTTTAC 46895 || || || || ||||| ||| | ||||| |||||| |||||| |||| |||| Sbjct 5091 GTCGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCCATCTTTTGG 5150 Query 46896 ATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGAC 46955 | || | || | ||||| |||||| ||||| |||||| | |||||||| ||| Sbjct 5151 CTCAAGAAGCGCGGTCTCATGCCTGGCCTGTCGTTCTCGAACGAGCTCATCTCGCGTGAC 5210 Query 46956 GAAGGACTACACACGGACTTTGCGTGTCTCTATTACAAGACGCGCGTGAATGAGAAATTA 47015 || || || ||||| |||||||| || |||| | || | | |||| || Sbjct 5211 GAGGGTCTGCACACCGACTTTGCCTGCCTCTTGTTCAGC---CACCTGAAGAAGCGCGCG 5267 Query 47016 AACTCGGACACGATCCTGAGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGTTTTTT 47075 || | |||||| | |||| | | ||||| ||| ||| || |||| ||||| Sbjct 5268 CACCCCGACACGGTGAACCGCATCATCACCGAGGCCGTGGCCATTGAGCAGGACTTTTTG 5327 Query 47076 ACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCT-ATGTGCGAATATAT 47134 || | || ||||||||| | || | ||||||||||| | | || |||||| | || || Sbjct 5328 ACCGACGCCCTGCCCGTCTCGCTGATCGGCATGAACGCGC-GCCTCATGTGCCAGTACAT 5386 Query 47135 TGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACCGAAATATTTTAATGCTCG 47194 |||||||||||| || || ||| |||| | ||||| | || || | | || |||| Sbjct 5387 TGAGTTTGTGGCCGACCGCCTGCTGGTCAACCTCGGCAACCCCAAGCACTACAA--CTCG 5444 Query 47195 --TAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAG 47252 || || ||||| |||||| | |||||||||||| ||||||| | || ||||||||| Sbjct 5445 GCGAACCCCTTTGACTTTATGGAGAACATTTCGCTCCAGGGCAAGTCGAACTTTTTCGAG 5504 >seq14 Length=25249 Score = 183 bits (202), Expect = 3e-41 Identities = 950/1474 (64%), Gaps = 85/1474 (6%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 |||||||| || |||||||||||||| ||||| | | || | ||||| ||| | ||| Sbjct 7769 TTGACCACCTGGAACTCGCCCGCCAGTACACGGCGCATGTAAATGTTGCTCGTGTACGGC 7710 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 ||||| |||| || ||| | || ||| ||||| || || ||||| ||||| | Sbjct 7709 TCAAAGCACTCGTTGAAGCCGAGGATCTGGCTCGTGGAGGCCGTCGGCATCGGCGCCATC 7650 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGG--ATGTTGTCCTTCAAAGTTTGCCAGTCCC 147070 | || || || |||||||||| || || || | |||| | || |||||||| Sbjct 7649 AGCAGCGAGTTCCGCAGACCGT--GCTGGGCAATCTGCGCCTTGAGCGTGGCCCAGTCCC 7592 Query 147071 ACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGAC 147130 ||| || |||| |||||||| ||||||||| || | || | |||||| | Sbjct 7591 ACAGGTCCGTCGGCGGGCGGTTCCACAGGTCGTACTGCAGGAGGCCCTGCGAGGCGGGGC 7532 Query 147131 TGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGC-GCCAATTCACAGCTTGCCTCGAGC 147189 |||| || |||| ||| || | | || |||| || ||||| ||| || Sbjct 7531 TGCCCTCGTACGTCTCGTACGGGCCAT-ATTCGGCAGCCAGCTCGCAGCTGCGCTCCAGG 7473 Query 147190 GCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCG 147249 || ||| ||| ||||| ||| |||||| ||| || | | ||| || | ||| ||| Sbjct 7472 GCCGCATGGTAGATGGTCTCGAAGATTTGCACGTTCAGCAGGCGCGCCTCCTGGCTGTCG 7413 Query 147250 TAAGGCATA-CGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGG 147308 || | ||| | || | || || |||||||| | |||||||| ||||| || || || Sbjct 7412 -AACGGATAGCCCATGATCATGAACGCATCGGCAAGACCCTGGACACCGATACCAATGGG 7354 Query 147309 TCGATG----CTTTTCGTTGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCAA 147364 || || | |||| || ||| ||||||| | | ||| |||| |||| || | Sbjct 7353 CCGGTGACGCATGTTCG-AGCGGCG---CGCGCTCTCCACGGGGTAGTAGTTGATGTCGA 7298 Query 147365 TAATCTTGTTGAGGTT-ACGCACTACAACTTTAGTTATTGTTTTG-AGTTTCTCGAAATC 147422 | || ||| ||||| |||| || || || | | || || || || ||| | Sbjct 7297 TGATGCGGTTCAGGTTCTTGCAC-ACCACCTTCGACA-CGTCATGCAGGCGCTGGAAGTT 7240 Query 147423 ATAAGTCCCGTCTTCGACACGTACG---CATTGGTTCACG--------GCGATAGACGCC 147471 || ||||||||| || | | | | | ||| || || |||||| Sbjct 7239 GTA-----CGTCTTCGAGGCGCCGGTGCCCTCGATGAACGTCGGCAGCGCAATCGACGCC 7185 Query 147472 AGATTGCAGACGGCCGTCTC-TTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTT 147530 || ||||| || |||||||| | ||||| |||||||| | || || | ||||||||| Sbjct 7184 AGGTTGCACACAGCCGTCTCGTCCGGCG-AGCTGTACTCGATAATCTCCGTGCACAGGTT 7126 Query 147531 GCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAA 147590 || || || |||| || | ||| ||||| || || || || ||| ||| | Sbjct 7125 CGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTCGCCGAGTCCTTGTA 7066 Query 147591 GAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTC---AACGATAAACCTATGCAGGTC 147647 || | | | || ||| ||||||| || | || || | | ||| ||| | Sbjct 7065 CAGGACGAAGGGGTTGCCCGTCTCGATCTGTGCCTCGAGAATGGCATACC---ACAGCTT 7009 Query 147648 CTGCGC--TCGCA-CCCGC-TGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACC 147703 |||||| | || ||| || | |||||||||| ||||| |||||| | Sbjct 7008 CTGCGCCTTGACAGAGCGCTTGGC----GCGGCCCTCGCGCTCGTATTTCTCGTAGAGAG 6953 Query 147704 GCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCG 147763 ||||| || ||||| ||||| ||||| |||||||| |||| || |||||||||| Sbjct 6952 CATCAAATTCTTCGCCATAGCAGTCGGCCAGGCCGGGGCACTCGGCGGGGCACATCAGCG 6893 Query 147764 ACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACA 147823 |||| | ||| | | ||||| ||||| |||| || || | ||||||||| | Sbjct 6892 ACCAGTCGCCGTTCTGCTCGACGCGGCGCATGAACAAGTCAGGAATCCACAGCGCCAGGA 6833 Query 147824 TAAGATCGCGCGCTTTGCA----ATCCTCGGCGCCCATGTTGCGTTTCAAATTAA-GCAC 147878 || |||||||| ||| |||| || | ||||| || || || | || Sbjct 6832 ACAGGTCGCGCGC-GCGCACCTCCTCCTTACCGTGGTTTTTGCG---CAGATCAATGAAC 6777 Query 147879 GCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TT 147935 | | | | ||| | |||||| || || | ||||| ||| | ||||| |||| || Sbjct 6776 TCGA-ACACGTCCGAGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGACGCTTGTT 6718 Query 147936 TCCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCC 147995 || |||||||| || | |||| | ||||||| | ||||| | |||||| | | || Sbjct 6717 GCCACCCTGGTCCACGTAGCGCGCTGTGTTGTTGTATACGCGGAGCATGGGCACAATACC 6658 Query 147996 GCT-CGCAGTGCCGTTGGT---GGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCA 148051 | | | || ||| || || || | || | || ||| || || | | ||| | Sbjct 6657 GTTGCTCA-CGCCATTCGTACCGGCAATGTACGAGC--CCG-TTGCACGGATGTTGTGGA 6602 Query 148052 CGTTAACGCCAATGCCGCC-GCCGTACTT--TGATATGGCAGCGCAATCGCC--CAATGT 148106 || | ||||| || || ||||| ||| |||| || ||| || | | || Sbjct 6601 TATTCAGACCAATACCACCGGCCGT-CTTGCTGAT----CATCGCGCACGTCTTGAGCGT 6547 Query 148107 CGTGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTG 148166 |||||| || ||||| ||||| || | || | | || || || ||||||| Sbjct 6546 GTCGTAGATACCCTCGATAGAGTCGTCCTTCATGCTCACAAGGAAGCAGGACGACATTTG 6487 Query 148167 CGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACT 148226 || | |||| || || ||| ||||| || |||||| ||||| || | Sbjct 6486 GGGGTTGGGCGTGCCAGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTCGGA 6427 Query 148227 CATCATGCGATACGTCTCAATAGCG-TCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGA 148285 ||| | || |||||||| ||| ||||| | || |||||||| ||||||| |||| Sbjct 6426 CATGTAGTTGTATGTCTCAATGGCGCTCTTC-ACATCCTCGCCGTGGATGCCCACAGCGA 6368 Query 148286 CGCGCATGAGCATGTGCTGTGGTCGTTCGGCAAC 148319 | ||||||||||||||||| || || || || || Sbjct 6367 CACGCATGAGCATGTGCTGGGGGCGCTCCGCGAC 6334 >seq102 Length=51898 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 131932 CTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATA 131991 ||| || || |||||||||||||||| ||||| ||| || ||||| ||||| | | | Sbjct 8988 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCCAGCTGCTTACCAGCAAA 8929 Query 131992 GATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTG 132051 ||| ||||||||||| || ||||| || || || || || ||| || || | | Sbjct 8928 GATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTT 8869 Query 132052 TTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAT 132111 || | || || | || ||||| |||| || | ||| || ||||| || || |||| Sbjct 8868 GTCGATCGTGTCCGACGATTCCACCTCGAGGGTAATCGTCTTGCCAGTGAGGGTCTTTAC 8809 Query 132112 GAAAATCTGCAT 132123 ||||| ||||| Sbjct 8808 AAAAATTTGCAT 8797 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 131932 CTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATA 131991 ||| || || |||||||||||||||| ||||| ||| || ||||| ||||| | | | Sbjct 9216 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCCAGCTGCTTACCAGCAAA 9157 Query 131992 GATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTG 132051 ||| ||||||||||| || ||||| ||||| || || || ||| || || | | Sbjct 9156 GATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATT 9097 Query 132052 TTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAT 132111 || | || || | || ||||| |||| | | ||| || ||||| || || || | Sbjct 9096 GTCAATCGTGTCCGACGATTCCACCTCGAGGGGAATCGTCTTGCCAGTGAGGGTCTTGAC 9037 Query 132112 GAAAATCTGCAT 132123 ||| |||||||| Sbjct 9036 GAAGATCTGCAT 9025 >seq27 Length=62815 Score = 87.8 bits (96), Expect = 2e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 131932 CTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATA 131991 ||| || || |||||||||||||||| ||| || || |||||||| ||||| | | Sbjct 52899 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 52958 Query 131992 GATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTG 132051 || ||||||||||| || ||||| ||||| || ||||| || || || | | Sbjct 52959 AATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACATT 53018 Query 132052 TTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAT 132111 || | || || | | ||| || || | || | ||| || ||||||||||| || | Sbjct 53019 GTCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTCTTGCCAGTCAGAGTCTTGAC 53078 Query 132112 GAAAATCTGCATG 132124 ||| || |||||| Sbjct 53079 GAAGATTTGCATG 53091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609835700440