Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq14 174 2e-38 seq102 125 7e-24 seq27 122 9e-23 seq105 109 6e-19 >seq14 Length=25249 Score = 174 bits (192), Expect = 2e-38 Identities = 929/1459 (64%), Gaps = 29/1459 (2%) Strand=Plus/Plus Query 7524 CTACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGT 7583 |||| || || ||||| ||| | |||||| || || |||||||| |||| || Sbjct 6309 CTACCTGCTGCGCATCAATGGCAAGGTCGCGGAGCGCCCCCAGCACATGCTCATGCGTGT 6368 Query 7584 GGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTC 7643 || |||||||| |||||||| || | | |||| | || || ||| | ||||| Sbjct 6369 CGCTGTGGGCATCCACGGCGAGGATGTGAAGAGCGCCATTGAGACATACAACTACATGTC 6428 Query 7644 TTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCA 7703 ||| ||||| ||||| ||||| ||| |||| || ||||| | || || Sbjct 6429 CGAGAAGGCCTTTACACACGCGTCGCCGACCCTGTTCAATGCTGGCACGCCCAACCCCCA 6488 Query 7704 ATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACAC 7763 | |||| || || || | | | |||| || ||| ||||| || || ||| |||| Sbjct 6489 AATGTCGTCCTGCTTCCTTGTGAGCATGAAGGACGACTCTATCGAGGGTATCTACGACAC 6548 Query 7764 GCTGCGCGAT-TGCGCCAATATTTCCAAATACGGC-GGCGGAATAGGTCTGAACGTAAAC 7821 ||| | || ||||| | || ||| ||||| || || || |||||||| | || Sbjct 6549 GCT-CAAGACGTGCGCGATGATCAGCAAG-ACGGCCGGTGGTATTGGTCTGAATATCCAC 6606 Query 7822 GACGTGCGCGCCAACGGTAGC-CGCATCGTGTCC--ACCAACGGAAAAGCCAGCGGTTTA 7878 || | || || ||||| || || | || | || || || || |||| | Sbjct 6607 AACATCCGTGC-AACGG--GCTCGTACATTGCCGGTACGAATGGCGTGAGCAACGGTATT 6663 Query 7879 GAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGGAAA---G 7935 | ||||||| | ||||| | ||| ||| | | ||| | || |||||||| || || | Sbjct 6664 GTGCCCATGCTCCGCGTATACAACAACACAGCGCGCTACGTGGACCAGGGTGGCAACAAG 6723 Query 7936 CGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGC-T 7994 || || ||| ||||||||| |||||||||||||| ||||| | | || ||| | | Sbjct 6724 CGTCCCGGTGCCTTTGCCATCTACCTGGAGCCGTGGCACTCGGACGTGTTCG-AGTTCAT 6782 Query 7995 AAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATT 8054 ||||||| ||| ||| || || |||||||| || ||| | | | Sbjct 6783 TGATCTGCGCAAAAACCACGGTAAGGAGGAGGTGCGCGCGCGCGACCTGTTCCTGGCGCT 6842 Query 8055 GTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTG 8114 |||| | || || |||| ||| | ||||| | ||| | |||||||| ||||| Sbjct 6843 GTGGATTCCTGACTTGTTCATGCGCCGCGTCGAGCAGAACGGCGACTGGTCGCTGATGTG 6902 Query 8115 CCCCGATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAA 8174 ||||| ||||| | || || || | ||||||| | ||| | Sbjct 6903 CCCCGCCGAGTGCCCCGGCCTGGCCGACTGCTATGGCGAAGAATTTGATGCTCTCTACGA 6962 Query 8175 ACAATACGAACACGACGGC-GCGTACGTGCGGCAAGTGAAAGCGCGCGACCTGCACCGCG 8233 ||||||| | ||| ||| ||| | ||| || || |||| | ||| | Sbjct 6963 GAAATACGAGCGCGAGGGCCGCGC-CAAGCGCTCTGTCAAGGCGCAGAAGCTGTGGTATG 7021 Query 8234 CCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCA 8293 ||||| |||| || | ||| || || | || | | | |||||||| ||| | | Sbjct 7022 CCATTCTCGAGGCACAGATCGAGACGGGCAACCCCTTCGTCCTGTACAAGGACTCGGCGA 7081 Query 8294 ACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAA 8353 || ||| ||||| || | ||| ||||||| || || || |||||| | || | Sbjct 7082 ACCGCAAGAGCAACCAGAAGAACCTGGGCACGATCAAGAGCTCGAACCTGTGCACGGAGA 7141 Query 8354 TTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTAA 8413 || | |||||||| |||| ||||| ||| || ||||| || |||||| | || Sbjct 7142 TTATCGAGTACAGCTCGCCGGACGAGACGGCTGTGTGCAACCTGGCGTCGAT-TGCGCTG 7200 Query 8414 ACG-CGTTCGTTGAT-----CGACGC-TCAAACACTTACGACTTTGAACAATTGAAAAAC 8466 || ||||| | || || ||| || || || ||| |||| | | || | || Sbjct 7201 CCGACGTTCATCGAGGGCACCGGCGCCTCGAAGACGTACAACTTCCAGCGCCTGCATGAC 7260 Query 8467 GCCGTGCAAGTGACG-GTACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTT 8525 | | | ||| | | | | | | | | |||||||| || |||| | || ||| | Sbjct 7261 GTGTCGAAGGTGGTGTGCAAGAACCTGA-ACCGCATCATCGACATCAACTACTACCCCGT 7319 Query 8526 GGAAGAAGCGCGCGTATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCT 8585 ||| |||||| ||||||||||| ||| | ||| |||| | || || || ||||| Sbjct 7320 GGAGAGCGCGCGCCGCTCGAACATGCGTCACCGGCCCATTGGTATCGGTGTCCAGGGTCT 7379 Query 8586 GGCCGACGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAA 8645 ||||| ||||| || || || || | ||| ||||| || |||||| |||| || Sbjct 7380 TGCCGATGCGTTCATGATCATGGGCTATCCGTTCGACAGCCAGGAGGCGCGCCTGCTGAA 7439 Query 8646 CATAAAAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCG 8705 | | |||| || || | || | | || | || |||||| | || || Sbjct 7440 CGTGCAAATCTTCGAGACCATCTACCATGCGGCCCTGGAGCGCAGCTGCGAGCTGGCTGC 7499 Query 8706 AGAATTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATA 8765 |||| ||| ||||||| |||||| ||||||||| ||| | || | |||| || Sbjct 7500 CGAATATGGCCCGTACGAGACGTACGAGGGCAGCCCCGCCTCGCAGGGCCTCCTGCAGTA 7559 Query 8766 CGACATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGC-AAAA 8824 |||| ||||||| | |||| || ||||| | ||| || | || || | | Sbjct 7560 CGACCTGTGGAACCGCCCGCCGACGGACCTGTGGGACTGG-GCCACGCTCAAGGCGCAGA 7618 Query 8825 TTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTG 8884 |||| || |||| |||| || |||||| || |||| ||||| || ||| | || Sbjct 7619 TTGCCCAGCACGGTCTGCGGAACTCGCTGCTGATGGCGCCGATGCCGACGGCCTCCACGA 7678 Query 8885 CTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGAC 8944 || || | || |||||| | ||||||||||| ||| | |||| | ||| || | | Sbjct 7679 GCCAGATCCTCGGCTTCAACGAGTGCTTTGAGCCGTACACGAGCAACATTTACATGCGCC 7738 Query 8945 GAGTGTTGGCCGGCGATTT 8963 | || |||| ||||| || Sbjct 7739 GTGTACTGGCGGGCGAGTT 7757 >seq102 Length=51898 Score = 125 bits (138), Expect = 7e-24 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| |||||| || |||||| ||||| || ||||||||||||| | || | Sbjct 9014 AGACGCAGCACGAGATGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGG 8955 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| || || ||||| |||| |||||| || || || || || || || Sbjct 8954 CCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCC 8895 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || ||||| ||| | ||||| ||||||||||| ||||| ||| Sbjct 8894 TTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGATTCCACCTCGAGGGTA 8835 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || || || || | || || || |||||||||||| || Sbjct 8834 ATCGTCTTGCCAGTGAGGGTCTTTACAAAAATTTGCATTGTG 8793 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| |||||| || ||||| ||||| || ||||||||||||| | || | Sbjct 9242 AGGCGCAGCACGAGATGCAGCGTACTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGG 9183 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| || || ||||| |||| |||||| || || || || ||||| || Sbjct 9182 CCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCC 9123 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || ||||| ||| | ||||| ||||||||||| ||||| | | Sbjct 9122 TTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGATTCCACCTCGAGGGGA 9063 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || | || || ||||| || ||||| Sbjct 9062 ATCGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 9025 >seq27 Length=62815 Score = 122 bits (134), Expect = 9e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563 ||||||||| || ||| ||||| || ||||||||||||| | |||| || ||| || Sbjct 52881 CACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCCTC 52940 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 |||||| || || || ||||||| |||||| || || || || ||||| || || || || Sbjct 52941 GAGCTGCTTACCAGCGAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTATCCTG 53000 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 || || ||||| ||| | ||||| || || || || || || || || || || Sbjct 53001 GATCTTGGCCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTCTT 53060 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||| || ||||| |||||||| Sbjct 53061 GCCAGTCAGAGTCTTGACGAAGATTTGCAT 53090 >seq105 Length=229645 Score = 109 bits (120), Expect = 6e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||||||||| |||||| ||||| || ||||||||||||| | |||| || Sbjct 227303 AGGCGCAGCACGAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGA 227244 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || || |||| ||||| || || || || || || || Sbjct 227243 CCATCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCC 227184 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | |||||||| || ||||| || || || Sbjct 227183 TTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTG 227124 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || ||||| | |||||| Sbjct 227123 ATCGTCTTCCCGGTCAGGGTCTTGACGAACACTTGCAT 227086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396953297080