Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq27 120 3e-22 seq102 89.7 4e-13 seq8 89.7 4e-13 seq105 86.0 5e-12 >seq27 Length=62815 Score = 120 bits (132), Expect = 3e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||||||||||| | |||| |||| |||||||| ||||| ||| || Sbjct 52900 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAA 52959 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || ||||||||||| ||||| || | ||||| ||||| ||||||| || | | Sbjct 52960 ATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACATTG 53019 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | || || || || || || | ||||| |||||||| || || Sbjct 53020 TCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTCTTGCCAGTCAGAGTCTTGACG 53079 Query 27237 AAGATTTGCATAGC 27250 ||||||||||| || Sbjct 53080 AAGATTTGCATGGC 53093 >seq102 Length=51898 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| |||| || | ||| | ||| || || || || |||||||||||| Sbjct 9023 CCACCACGCAGACGCAGCACGAGATGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 8964 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | || || ||||| ||||| || | || ||||||||||| ||||| || Sbjct 8963 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGTTGGTCCGGAGGA 8904 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| || || |||||| || | | | || | ||||| | | ||| || Sbjct 8903 ATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGATTCCACC 8844 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||| || || || || ||||| |||||||| Sbjct 8843 TCGAGGGTAATCGTCTTGCCAGTGAGGGTCTTTACAAAAATTTGCAT 8797 >seq8 Length=40485 Score = 89.7 bits (98), Expect = 4e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 108262 TACTCGCCGACGCGTCTTTCGAAAAAGTTGGTTTTGCCTTCTAGCGAAATCATGTTCATA 108321 || ||| | ||||| | ||||||||||| | ||||| | |||||||| | | |||| Sbjct 5521 TAGTCGGCCACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGGAGCGAAATGTTCTCCATA 5462 Query 108322 AAATGAAAGGGATTAGGTGTGTAATAGTATTTGGAGTATTTGAGATTAGTGAGCAACCAA 108381 || | |||||| || | | || |||| |||| || ||| || |||| | Sbjct 5461 AAGTCAAAGGGGTTCGCCGAGTTGTAGTGCTTGGGGTTGCCGAGGTTGACCAGCAGGCGG 5402 Query 108382 TCGGCCACAAACTCTATATAACTGCACATCAAGTGCGAATTCATGCCCAACAGCGCCACG 108441 |||||||||||||| || || |||||| | | ||| |||||||| | ||||| ||| Sbjct 5401 TCGGCCACAAACTCAATGTACTGGCACATGAGGCGCGCGTTCATGCCGATCAGCGAGACG 5342 Query 108442 GGTATTGCGTTAGTGAAAAAGT 108463 || | |||| || ||||||| Sbjct 5341 GGCAGGGCGTCGGTCAAAAAGT 5320 >seq105 Length=229645 Score = 86.0 bits (94), Expect = 5e-12 Identities = 141/203 (69%), Gaps = 3/203 (1%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||||||||||| | |||| | || || ||||| || || ||| | Sbjct 227276 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCCTCCAGCTGCTTGCCCGCGAAG 227217 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || || |||||||| ||||| || | |||||| || || ||||||| |||| | Sbjct 227216 ATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTC 227157 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | || || || || || || | || || ||||| || || || Sbjct 227156 TCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCGGTCAGGGTCTTGACG 227097 Query 27237 AAGATTTGCA---TAGCTGCTAA 27256 || | ||||| || ||||||| Sbjct 227096 AACACTTGCATGGTAACTGCTAA 227074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933214034648