Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq14 233 2e-56 seq8 87.8 2e-12 >seq14 Length=25249 Score = 233 bits (258), Expect = 2e-56 Identities = 904/1406 (64%), Gaps = 41/1406 (3%) Strand=Plus/Minus Query 110704 CAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGT 110763 || ||| ||||| | ||||| || |||||||| || || || | ||| || || Sbjct 7734 CATGTAAATGTTGCTCGTGTACGGCTCAAAGCACTCGTTGAAGCCGAGGATCTGGCTCGT 7675 Query 110764 GGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCG 110823 |||||| || ||||| || ||||||| || ||| || ||||| | || || | Sbjct 7674 GGAGGCCGTCGGCATCGGCGCCATCAGCAGCGAGTTCCGCAGACCGTGCTGGGCAATCTG 7615 Query 110824 TTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883 ||||||| ||||||| | | | | | | | ||||| ||| |||| Sbjct 7614 CGCCTTGAGCGTGGCCCAGTCCCACAGGTCCGTCGGCGGGCGGTTCCACAGGTCGTACTG 7555 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943 || | || || || ||||| ||||| | || || || | || | | |||| Sbjct 7554 CAGGAGGCCCTGCGAGGCGGGGCTGCCCTCGTACGTCTCGTACGGGCCATATTCGGCAGC 7495 Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003 || || ||||| |||||||| || || || ||||| || ||||| | | |||| Sbjct 7494 CAGCTCGCAGCTGCGCTCCAGGGCCGCATGGTAGATGGTCTCGAAGATTTGCACGTTCAG 7435 Query 111004 CTCCTTGGCTTCAT--CTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061 | || || | ||| || || | |||| | || || |||| || ||| Sbjct 7434 CAGGCGCGCCTCCTGGCTG--TCGAACGGATAGCCCATGATCATGAACGCATCGGCAAGA 7377 Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 111121 || || ||||| | |||||| || | ||| ||||| || || ||||| |||| ||| Sbjct 7376 CCCTGGACACCGATACCAATGGGCCGGTGACGCATGTTCGAGCGGCGCGCGCTCTCCACG 7317 Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181 || || | || |||| |||| ||||| || || ||| || | ||| | | ||| Sbjct 7316 GGGTAGTAGTTGATGTCGATGATGCGGTTCAGGTTCTTGCACACCACCTTCGACACGTCA 7257 Query 111182 TG----------AAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGG 111231 || ||||| | | | || | | || || | || ||| || | || Sbjct 7256 TGCAGGCGCTGGAAGTTGTACGTCTTCGAG-GCGCCGGTGCCCTCGATGA---ACGTCGG 7201 Query 111232 AAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAAT 111291 || || || || |||| ||||| ||||||||||| ||| ||||||| | ||| Sbjct 7200 CAGCGCAATCGACGCCAGGTTGCACACAGCCGTCTCGTCCGGCGAGCTGTACTCGATAAT 7141 Query 111292 TTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTT 111351 || || || | ||| || ||||| ||||| |||| ||||| ||||| ||||| ||| Sbjct 7140 CTCCGTGCACAGGTTCGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTT 7081 Query 111352 GCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGC 111411 || |||||||| || | | |||| | |||||||| |||||| | |||||| || Sbjct 7080 CGCCGAGTCCTTGTACAGGACGAAGGGGTTGCCCGTCTCGATCTGTGCCTCGAGAATGGC 7021 Query 111412 CTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTG 111470 | ||| | | || ||| || | ||| | ||||| || ||||| |||||| || Sbjct 7020 ATACCACAGCTTCTGCGCCTTG-ACAGAGCGCTTGGCGCGGCCCTCGCGCTCGTATTTCT 6962 Query 111471 TGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGA 111529 |||||| || ||||| || || ||| || ||||| || || || || | | || Sbjct 6961 CGTAGAGAGCATCAAATTCTTC-GCCATAGCAGTCGGCCAGGCCGGGGCACTCGGCGGGG 6903 Query 111530 CAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 111589 || | || ||||| | || | ||| || || |||||| | ||| ||||||||| Sbjct 6902 CACATCAGCGACCAGTCGCCGTTCTGCTCGACGCGGCGCATGAACAAGTCAGGAATCCAC 6843 Query 111590 AGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCA 111649 || | || || || | || |||| || | ||| ||||| || | ||| Sbjct 6842 AGCGCCAGGAACAGGTCGCGCGCGCGCACCTCCTCCTTACCGTGGTTTTTGCGCAGATCA 6783 Query 111650 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGA 111709 | |||||| | | |||| |||||| ||||| || |||| || | | || || Sbjct 6782 ATGAACTCGAACACGTCCGAGTGCCACGGCTCCAGGTAGATGGCAAAGGCACC---GGGA 6726 Query 111710 CGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGA 111763 ||| ||| | || | || |||||||||||| ||| ||||||| ||||| || Sbjct 6725 CGCTTGTTGCCACCCTGGTCCACGTAGCGCGCTGTGTTGTTGTATACGCGGAGCATGGGC 6666 Query 111764 ATAATACCATCTGAT-TGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACA 111820 | |||||| | || | ||||| || || || |||||| | || | | Sbjct 6665 ACAATACCGT-TGCTCACGCCATTCGTACCGGCAATGTACGAG--CCCGTTGCACGGATG 6609 Query 111821 TCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGA 111880 | ||||| | || |||||||| || ||| ||| ||| ||| ||| | | || Sbjct 6608 TTGTGGATATTCAGACCAATACCACCGGCCGTCTTGCTGATCATCGCGCACGTCTTGAGC 6549 Query 111881 GTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATC 111940 || | |||||||| | ||| ||||| ||||| || | ||||||||| ||||| Sbjct 6548 GTGTCGTAGATACCCTCGATAGAGTCGTCCTTCATGCTCACAAGGAAGCAGGACGACATT 6489 Query 111941 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT--T 111998 || || | || || ||||||||||| ||||| || | ||||| || | | ||| | Sbjct 6488 TGGGGGTTGGGCGTGCCAGCATTGAACAGGGTCGGCGACGCGTG--TGTAAAGGCCTTCT 6431 Query 111999 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTG 112058 |||||| | || ||||||||| | | | | | || || ||||||||||| | | Sbjct 6430 CGGACATGTAGTTGTATGTCTCAATGGCGCTCTTCACATCCTCGCCGTGGATGCCCACAG 6371 Query 112059 CGACCCGCATGAACATGTACTGTGGG 112084 |||| ||||||| ||||| ||| ||| Sbjct 6370 CGACACGCATGAGCATGTGCTGGGGG 6345 >seq8 Length=40485 Score = 87.8 bits (96), Expect = 2e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| |||||||| || || || || || || || ||||| | || || Sbjct 5234 GGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCC 5175 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777 ||||||||||| |||||||| | |||| | || | | || || || ||||| ||||| Sbjct 5174 AGGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGAGGCAAACGAGCCCGAGAAAAAGAT 5115 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAG 122820 ||||| || ||||| || | ||||| || | ||| ||| Sbjct 5114 GCCCTCGACGGCGGCAAAGGCGACCAGGCGCTCCGAGAACGAG 5072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030202258400