Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq8 116 5e-21 >seq8 Length=40485 Score = 116 bits (128), Expect = 5e-21 Identities = 176/245 (72%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || ||| |||||||||||||| |||||||| || |||||||| |||| || Sbjct 5234 GGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCC 5175 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 ||||||||||| |||||||| | ||| || || | ||| ||||| ||||| ||||| Sbjct 5174 AGGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGAGGCAAACGAGCCCGAGAAAAAGAT 5115 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA-A 130193 ||||| || || || || | || ||||| | || ||| | | |||| | | Sbjct 5114 GCCCTCGACGGCGGCAAAGGCGACCAGGCGCTCCGAGAACGAG-GCGCGCTTGTCCGAGA 5056 Query 130194 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGA-TACACGGGACGGTCTGGATCGCTTCA 130252 ||| || ||||||| ||||| | || || ||| |||| ||||| ||| || | | Sbjct 5055 TCCAGCGCAAGGCCCACTCGGCCTTCTGCTTGACGACA-GGGATGGTCTCGATGGCGTTA 4997 Query 130253 AAGAG 130257 ||||| Sbjct 4996 AAGAG 4992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433429729240