Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq14 190 2e-43 seq8 113 5e-20 seq195 87.8 2e-12 >seq14 Length=25249 Score = 190 bits (210), Expect = 2e-43 Identities = 692/1063 (65%), Gaps = 35/1063 (3%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| ||||||| || || | || || || || || || | | | Sbjct 6345 CCCCCAGCACATGCTCATGCGTGTCGCTGTGGGCATCCACGGCGAGGATGTGAAGAGCGC 6404 Query 104281 CTTGGAGACATACGACAAGATGTCCCA--AGGTATGTTCATTCACGCAACACCAACCCTC 104338 | | ||||||||| || | |||||| | ||| | | || ||||| | || ||||| Sbjct 6405 CATTGAGACATACAACTACATGTCCGAGAAGGCCTTTACA--CACGCGTCGCCGACCCTG 6462 Query 104339 TTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398 ||||||||||| || || | ||||||||||| ||||||||| | || ||||| Sbjct 6463 TTCAATGCTGGCACGCCCAACCCCCAAATGTCGTCCTGCTTCCTTGTGAGCATGAAGGAC 6522 Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458 ||||| ||| | |||||||| | || || | | ||| ||| ||| ||| ||| Sbjct 6523 GACTCTATCGAGGGTATCTACGACACGCTCAAGACGTGCGCGATGATCAGCAAGACGGCC 6582 Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGA 104516 || |||||||| || | ||||| | | | || | |||||| || || | Sbjct 6583 GGTGGTATTGGTCTGAATATCCACAACATCCGTGCAACGGG--CTCGTACATTGCCGGTA 6640 Query 104517 CAAATGGTCA-ATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 104575 | ||||| | || | |||||| | || ||||| ||||||| ||| |||||||||| Sbjct 6641 CGAATGGCGTGAGCA-ACGGTATTGTGCCCATGCTCCGCGTATACAACAACACAGCGCGC 6699 Query 104576 TATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCA 104629 || || | || | ||| ||||| || | | || |||| || ||||| Sbjct 6700 TACGTGGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTTGCCATCTACCTGGAGCCG 6756 Query 104630 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCG 104689 |||||| |||| | | |||||| |||| |||| ||||| ||| | ||||||| | Sbjct 6757 TGGCACTCGGACGTGTTCGAGTTCATTGATCTGCGCAAAAACCACGGTAAGGAGGAGGTG 6816 Query 104690 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749 || ||||| || ||| || || |||||||| || | |||||| | || ||| Sbjct 6817 CGCGCGCGCGACCTGTTCCTGGCGCTGTGGATTCCTGACTTGTTCATGCGCCGCGTCGAG 6876 Query 104750 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGT 104808 ||| ||| | ||||| || | || || | | || || || || |||| ||| | Sbjct 6877 CAGAACGGCGACTGGTCGCTGATGTGCCCCGCCGAGTGCCCCGGCCTGGCCGACTGCTAT 6936 Query 104809 GGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGA- 104867 || || || ||||| || || ||| || |||||| || || || || | ||| Sbjct 6937 GGC-GAAGAATTTGATGCTCTCTACGAGAAATACGAGCGCGAGGGCCGCGCCAA-GCGCT 6994 Query 104868 CGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926 | || | || || || | ||||| | || |||||| || | || | |||||| || | Sbjct 6995 CTGT-CAAGGCGCAGAAGCTGTGGTATGCCATTCTCGAGGCACAGATCGAGACGGGCAAC 7053 Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986 || | | | || ||||| ||| | |||| ||||| || || ||||| |||| | Sbjct 7054 CCCTTCGTCCTGTACAAGGACTCGGCGAACCGCAAGAGCAACCAGAAGAACCTGGGCACG 7113 Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAA--GATGAGACGG 105044 |||||||| || || || || || || || | || | |||| || ||||||| Sbjct 7114 ATCAAGAGCTCGAACCTGTGCACGGAGATTATCGAGT--ACAGCTCGCCGGACGAGACGG 7171 Query 105045 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGT--AT--GTGGATCCAGAG--ACAA 105098 ||||||| ||||| || || || || || || | || || || || | | | | Sbjct 7172 CTGTGTGCAACCTGGCGTCGATTGCGCTGCCGACGTTCATCGAGGGCACCGGCGCCTCGA 7231 Query 105099 AGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACA 105158 |||| | | | | || || || || |||| || ||| ||||| ||| Sbjct 7232 AGACGTACAACTTCCAGCGCCTGCATGACGTGTCGAAGGTGGTGTGCAAGAACCTGAACC 7291 Query 105159 GAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACC 105218 | | || || | || | |||||||| |||| || || || || ||| | |||| Sbjct 7292 GCATCATCGACATCAACTACTACCCCGTGGAGAGCGCGCGCCGCTCGAACATGCGTCACC 7351 Query 105219 GTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT 105261 | || |||||| ||||||| |||||||| || |||| ||||| Sbjct 7352 GGCCCATTGGTATCGGTGTCCAGGGTCTTGCCGATGCGTTCAT 7394 >seq8 Length=40485 Score = 113 bits (124), Expect = 5e-20 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCT 94863 ||||| || |||| ||||| || ||||| ||||| ||||| || || || | | Sbjct 5082 GAGCGCCTGGTCGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCC 5141 Query 94864 ATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 94923 || | ||||||||||||||| ||||||||||| || || | ||||| |||||||| ||| Sbjct 5142 ATCTTTTGGCTCAAGAAGCGCGGTCTCATGCCTGGCCTGTCGTTCTCGAACGAGCTCATC 5201 Query 94924 TCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 || ||||||||||| || ||| || ||||| Sbjct 5202 TCGCGTGACGAGGGTCTGCACACCGACTTTGC 5233 >seq195 Length=32421 Score = 87.8 bits (96), Expect = 2e-12 Identities = 195/293 (67%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 169160 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 169219 |||| || || ||||||||||| || ||||| || || ||||||||||| || Sbjct 7836 TTGATGATCAGGCCCTTGATGTGCGAGCCGTCAAAGTCCTGGTCGGTCATGATCATCAGG 7777 Query 169220 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 169279 | || ||||| || | || | ||| |||| || || || || || | ||| Sbjct 7776 CTGCCGTACCGCAGTCCATCGACGCTGTCGTAGACCTTGCCGTGCTGCAGCCCGAGAATC 7717 Query 169280 TTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACA 169339 | ||||| | |||| ||| ||| ||| ||| | || || ||||| ||| Sbjct 7716 TCCTTGATGTGTTTGATCTCGGCGTTCTTCATGATCTGGTCGTGCGACGCCTCGCGCACA 7657 Query 169340 TTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGA 169399 || ||| || || || ||||| |||||||| ||| || || || || || Sbjct 7656 TTGAGCAGCTTGCCGCGCAGCGGGAACACACCGTACGCATCGCGGCCGACCTCGCTGATG 7597 Query 169400 CCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA 169452 |||| || ||||| | ||| |||||||| |||||||||| ||||||||| || Sbjct 7596 CCCGACACAGCGAGCGCCTTGGCCGAGTCGCCCTCGGTGAGGATGAGCGTGCA 7544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259130415960