Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq14 318 6e-82 seq195 158 1e-33 seq8 154 2e-32 >seq14 Length=25249 Score = 318 bits (352), Expect = 6e-82 Identities = 531/762 (70%), Gaps = 4/762 (1%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| ||||| |||| |||||||| || || | | | | | |||||| ||| Sbjct 6359 TCATGCGTGTCGCTGTGGGCATCCACGGCGAGGATGTGAAGAGCGCCATTGAGACATACA 6418 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 ||| ||| | | ||| |||||| ||||| |||| ||||||||||| ||||| ||| Sbjct 6419 ACTACATGTCCGAGAAGGCCTTTACACACGCGTCGCCGACCCTGTTCAATGCTGGCACGC 6478 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 |||| || |||||| ||||||||| ||| |||||||| ||||| ||||| || | Sbjct 6479 CCAACCCCCAAATGTCGTCCTGCTTCCTTGTGAGCATGAAGGACGACTCTATCGAGGGTA 6538 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 ||||||| ||||||||| ||| || ||| |||| | | |||||||| ||| | Sbjct 6539 TCTACGACACGCTCAAGACGTGCGCGATGATCAGCAAGACGGCCGGTGGTATTGGTCTGA 6598 Query 53433 ACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492 | | ||| ||||||| | ||| | || || ||||| ||||| | | | Sbjct 6599 ATATCCACAACATCCGTGCAACGGGCTCGTACATTGCCGGTACGAATGGCGTGAGCAACG 6658 Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552 | || ||||| ||||||||||| | ||||||||| || || ||||| |||||||||| Sbjct 6659 GTATTGTGCCCATGCTCCGCGTATACAACAACACAGCGCGCTACGTGGACCAGGGTGGCA 6718 Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612 ||||| || | || ||||||||||| |||||||||||| | ||| | | |||| Sbjct 6719 ACAAGCGTCCCGGTGCCTTTGCCATCTACCTGGAGCCGTGGCACTCGGACGTGTTCGAGT 6778 Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAG 53672 | | || ||||| || || ||| | || ||| ||||| || |||||||| | Sbjct 6779 TCATTGATCTGCGCAAAAACCACGGTAAGGAGGAGGTGCGCGCGCGCGACCTGTTCCTGG 6838 Query 53673 CTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGA 53732 | ||||||||||| ||| | ||||||| || ||| || ||| || |||| |||| Sbjct 6839 CGCTGTGGATTCCTGACTTGTTCATGCGCCGCGTCGAGCAGAACGGCGACTGGTCGCTGA 6898 Query 53733 TGTGCCCGAACGAGTGCCCCGGCCT-CCAGGGTGTCTACGGTGAGGAGTTTAACGAGATG 53791 ||||||| ||||||||||||||| | | || ||| || || || ||| | | | Sbjct 6899 TGTGCCCCGCCGAGTGCCCCGGCCTGGCCGACTG-CTATGGCGAAGAATTTGATGCTCTC 6957 Query 53792 TATCGGACGTACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATG 53850 || || |||| || | |||||||| |||| |||||||||| || | || Sbjct 6958 TACGAGAAATACG-AGCGCGAGGGCCGCGCCAAGCGCTCTGTCAAGGCGCAGAAGCTGTG 7016 Query 53851 GGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTC 53910 | |||| || ||| || ||| | |||||||| | || | | | |||||||| || Sbjct 7017 GTATGCCATTCTCGAGGCACAGATCGAGACGGGCAACCCCTTCGTCCTGTACAAGGACTC 7076 Query 53911 GGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAA 53952 || ||| |||||||||||||||||| | ||| ||||| Sbjct 7077 GGCGAACCGCAAGAGCAACCAGAAGAACCTGGGCACGATCAA 7118 Score = 93.3 bits (102), Expect = 5e-14 Identities = 298/457 (65%), Gaps = 13/457 (3%) Strand=Plus/Plus Query 55478 GGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATG 55537 || || || ||||| ||||| ||||||| ||||| || || || ||| |||||| | Sbjct 7630 GGTCTGCGGAACTCGCTGCTGATGGCGCCGATGCCGACGGCCTCCACGAGCCAGATCCTC 7689 Query 55538 GGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCA 55597 ||| ||||||| || ||||||||||||| |||||| ||| ||||||| || || Sbjct 7690 GGCTTCAACGAGTGCTTTGAGCCGTACACGAGCAACATTTACATGCGCCGTGTACTGGCG 7749 Query 55598 GGTGAGTTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGG 55657 || ||||| || ||||| | || | || || || | ||| Sbjct 7750 GGCGAGTTCCAGGTGGTCAACCCGTGGCTGCTGCGCGAGCTTGTCGAGCTGGGTCTCTGG 7809 Query 55658 AACCCGCAGATCAAG---ACGGATATTGTGCGGAACGGGGGGTCCGTCCAGAA----TCT 55710 ||| ||| ||| | | ||||| || |||| || || ||||||| || Sbjct 7810 AACGACTCGATGAAGCAAAAGATTATTGCGC---ACGGCGGCTCGATCCAGAACATTGCT 7866 Query 55711 GGAGATTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAG 55770 || ||||| | |||||| | ||| |||||||||||||||| || ||| Sbjct 7867 GG-CATTCCCGACCACATCAAGGCCCTCTACAAGACGGTGTGGGAGATTAGCCAAAAGGT 7925 Query 55771 TCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACAT 55830 | ||||||||| ||| || ||||| |||| | |||| ||| || ||||| Sbjct 7926 GATTATTGACATGGCTGCGGACCGTGGCGCGTTTGTGTGCCAGAGCCAAAGCCTCAACAT 7985 Query 55831 CTTCATG-GAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGA 55889 | || | | | | ||| | || | | ||||||||||||||||| ||||||| Sbjct 7986 TCACCTGAGCGCGCCGACCTTTGGTC-AGCTTACGTCGATGCACTTTTACGGCTGGAAGA 8044 Query 55890 AGGGACTCAAGACGGGTATGTACTATCTGCGGACCCG 55926 |||| ||||||||||| |||||| |||| || || Sbjct 8045 AGGGCCTCAAGACGGGCTCGTACTACTTGCGCACGCG 8081 >seq195 Length=32421 Score = 158 bits (174), Expect = 1e-33 Identities = 243/343 (71%), Gaps = 4/343 (1%) Strand=Plus/Minus Query 152769 GTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAG 152828 ||||| || || ||||||||||||||| ||||||| ||| |||||||||||||||||| Sbjct 7837 GTTGATGATCAGGCCCTTGATGTGCGAGCCGTCAAAGTCCTGGTCGGTCATGATCATCAG 7778 Query 152829 ACGACCGTAGCGCAGGTCA-CGTAG-TGACCCGTAGACCTTTCCATGTTGAAGCCCGAGG 152886 | ||||| ||||| || || | || |||||||||| || || || |||||||| Sbjct 7777 GCTGCCGTACCGCAGTCCATCGACGCTG--TCGTAGACCTTGCCGTGCTGCAGCCCGAGA 7720 Query 152887 ATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCATCCCGA 152946 |||| |||| || | || | || | | | ||| | || || || || Sbjct 7719 ATCTCCTTGATGTGTTTGATCTCGGCGTTCTTCATGATCTGGTCGTGCGACGCCTCGCGC 7660 Query 152947 ACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGCCTACAACGCTC 153006 |||||| || |||| || || || || ||||| ||| |||| | |||||| || |||| Sbjct 7659 ACATTGAGCAGCTTGCCGCGCAGCGGGAACACACCGTACGCATCGCGGCCGACCTCGCTG 7600 Query 153007 AGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTACAGTCG 153066 | || | | ||| || || || |||||||| |||||||||| || ||||| || ||| Sbjct 7599 ATGCCCGACACAGCGAGCGCCTTGGCCGAGTCGCCCTCGGTGAGGATGAGCGTGCACTCG 7540 Query 153067 TGAGACCGATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTGG 153109 || | || |||||||| || ||||| || ||||||| Sbjct 7539 GCGCTGCGCTTCGTGCCGGCCCAATTCGCGTCCTCGAGCTTGG 7497 Score = 143 bits (158), Expect = 3e-29 Identities = 302/447 (68%), Gaps = 14/447 (3%) Strand=Plus/Minus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 || || |||||||| || || || || | ||| | ||||||||| || ||||| || Sbjct 8715 CCCGTGCCGATACCGTCGGCGCCGTTGAGCAGCACTTGCGGCACGACCGGCACGTACCAC 8656 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 || ||||| | | | ||||| || || ||| ||||||| ||| | ||| | || Sbjct 8655 TCGGGCTCGATGCTCTGCCCGTCCTCGTCGAGGTAGTTGAGCAGCGCGTCGTCCTTGGGG 8596 Query 117272 TCGAATATGTT---CTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCA 117328 | ||| | | | || | | ||| | |||| |||||||||||||||| ||| || Sbjct 8595 TGGAAGAGCTGGCGCGTGATGCGCGGCAC--GGCG-GTGAAAATGTAACGAGCGCTGGCC 8539 Query 117329 GCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGG 117388 || |||||||| || | |||||||| || || || | ||| | | |||| | Sbjct 8538 GCGTCCTTGCCGCCCATACTGCGCGTACCAAACTGGCCGTTGGGCATGAGCATATTCACG 8479 Query 117389 TTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGT----ACCTTGGAGGCTCGC 117444 |||||| ||| ||||| || || | ||||||||| ||| || ||| Sbjct 8478 TTGTTGCTGCCGCAAAAGTCCTGCGCGAGACCGACAATCGTCATCACC----AGACTCTG 8423 Query 117445 CTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCAT 117504 || |||||||| |||||||| ||||| | ||||| ||| |||||| |||||| || Sbjct 8422 GTCGCCATGGTGGTACGCCGTGTGCTCTGAGACGTAACCCTGCAGCTGCTGCACCTTGAT 8363 Query 117505 GTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAG 117564 || | | | ||||| ||||| |||| || | | ||||||||||| | ||||| || Sbjct 8362 TTCCGTCTTGAGGTTGCGCTTGAAGCAGCCAAACAGGACCTTGCGCTGGCCGGGCTTGAG 8303 Query 117565 ACCATCCGCCACGTGAGGGATCGAACG 117591 ||||| | ||| || ||||| || Sbjct 8302 GCCATCGACGACGCTCGGAATCGAGCG 8276 Score = 141 bits (156), Expect = 1e-28 Identities = 231/330 (70%), Gaps = 2/330 (1%) Strand=Plus/Minus Query 118013 AGCCCCTTGATATGGGAACCGTCCAGATCCGCATCGGTCATGATCATCAGGCGGCCGTAC 118072 || |||||||| || || ||||| | ||| ||||||||||||||||||| ||||||| Sbjct 7827 AGGCCCTTGATGTGCGAGCCGTCAAAGTCCTGGTCGGTCATGATCATCAGGCTGCCGTAC 7768 Query 118073 CGTAAATCTCTC-AGGGAGTTATAAACCTTACCATGTTGGAGCCCGAGGATCTTTTTAAG 118131 || | || || | | || || ||||| || || || |||||||| |||| || | Sbjct 7767 CGCAG-TCCATCGACGCTGTCGTAGACCTTGCCGTGCTGCAGCCCGAGAATCTCCTTGAT 7709 Query 118132 GTTGGAAAATTCCTCATTTTCCGTCACCTGTTTTATGGTGGCGTCCCGAACGTTGCGCGG 118191 || | || | || | | | | ||| | | || || || || ||| || | Sbjct 7708 GTGTTTGATCTCGGCGTTCTTCATGATCTGGTCGTGCGACGCCTCGCGCACATTGAGCAG 7649 Query 118192 CTTACCCCGCAGTGGAAACACGCCAAACTTGTCACGGCCCACAACGCTCAAGCCGGCAAT 118251 ||| || ||||| || ||||| || || || ||||| || |||| | ||| | | Sbjct 7648 CTTGCCGCGCAGCGGGAACACACCGTACGCATCGCGGCCGACCTCGCTGATGCCCGACAC 7589 Query 118252 AGCAAGGGCCTTCGCCGAGTCACCCTCGGTAATAATAAGAGTGCACTCGGTGCTGCGATG 118311 ||| || ||||| |||||||| |||||||| | || || |||||||||| |||||| | Sbjct 7588 AGCGAGCGCCTTGGCCGAGTCGCCCTCGGTGAGGATGAGCGTGCACTCGGCGCTGCGCTT 7529 Query 118312 AGTACCGGCCCAATTAGCATCATCCAGCTT 118341 || ||||||||||| || || || ||||| Sbjct 7528 CGTGCCGGCCCAATTCGCGTCCTCGAGCTT 7499 Score = 116 bits (128), Expect = 4e-21 Identities = 198/287 (69%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 ||||| ||||| || | ||||||||| |||||||| || ||||| |||||||| Sbjct 8562 GTGAAAATGTAACGAGCGCTGGCCGCGTCCTTGCCGCCCATACTGCGCGTACCAAACTGG 8503 Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148 || |||| ||| | || | ||||||| ||| || | ||| || | | ||| Sbjct 8502 CCGTTGGGCATGAGCATATTCACGTTGTTGCTGCCGCAAAAGTCCTGCGCGAGACCGACA 8443 Query 152149 ATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCC 152208 ||||| | ||||||| || || ||||| |||||||| ||||| | || ||| ||| Sbjct 8442 ATCGTCATCACCAGACTCTGGTCGCCATGGTGGTACGCCGTGTGCTCTGAGACGTAACCC 8383 Query 152209 GCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACC 152268 || |||| |||||| || |||||| | ||||| ||||| ||| | | | ||| Sbjct 8382 TGCAGCTGCTGCACCTTGATTTCCGTCTTGAGGTTGCGCTTGAAGCAGCCAAACAGGACC 8323 Query 152269 TTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACG 152315 ||||||||| || || | || || || ||| |||||||| || Sbjct 8322 TTGCGCTGGCCGGGCTTGAGGCCATCGACGACGCTCGGAATCGAGCG 8276 >seq8 Length=40485 Score = 154 bits (170), Expect = 2e-32 Identities = 345/511 (68%), Gaps = 18/511 (4%) Strand=Plus/Minus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849 || ||||| ||||| ||||||||||| || || |||||||| | ||||||||||| Sbjct 5194 TCGTTCGAGAACGACAGGCCAGGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGAGGCA 5135 Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909 || || || ||| |||||||| ||||| ||||||||||| ||||| | || |||| Sbjct 5134 AACGAGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGGCGACCAGGCGCTCCGAGAAC 5075 Query 74910 GGTGCATCGGAAGTC----ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGG 74965 | || || ||| ||||| | ||||| || || || | ||||| |||| Sbjct 5074 GAGGC-GCGCTTGTCCGAGATCCAGCGCAAGGCCCACTCGGCCTTCTGCTTGACGACAGG 5016 Query 74966 GACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTC 75025 || || ||||| || | |||||| | | || || | || || | | |||| Sbjct 5015 GATGGTCTCGATGGCGTTAAAGAGGTATTCGCGCTGCTCCGACTCACGGATGTACGTGTC 4956 Query 75026 AATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAA 75085 ||| | || |||||||||||||| || || ||| | | ||| | ||||||| Sbjct 4955 AATGAGGAGCGAGTACGTCTCCGAGTGGATGTTCTCCATCATAATCTGAAAGCCGTAGAA 4896 Query 75086 AGACCGCGCCTCTGCAATCTGTACATC--CTTTGAAAAATTCATGTCGATATTCTCCATG 75143 | || ||||| || ||| || || | |||| || | | ||||| || Sbjct 4895 GCAGCGGGCCTCAGCGGCCTGCACCTCGGCGCTGAAGCGCTC--CACCAGGTTCTCGTTG 4838 Query 75144 ACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCA--- 75200 ||||||||||| ||||| || || || ||||| || | | ||||||||||||| Sbjct 4837 ACGATGCCGTCTGAGGCAGCAAAGAAGGCCAGGACATGGCTTACAAAGTGGCGCTCATTG 4778 Query 75201 TCGTCAGTGAGTTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTC 75260 |||| || | | |||||| || | ||||||| || || || ||||||||| | ||| Sbjct 4777 TCGTTCATGCGGTGGTCCCAGTCGTGCAGGTCCTTCGACAGGTCCATCTCCTCGGCGGTC 4718 Query 75261 CAGAA--ACTCCCAATC-GCCTTTTTGTACA 75288 ||||| || || || ||||| ||||||| Sbjct 4717 CAGAACGACGCC---TCGGCCTTCTTGTACA 4690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214433594200