Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq14 102 1e-16 >seq14 Length=25249 Score = 102 bits (112), Expect = 1e-16 Identities = 556/876 (63%), Gaps = 20/876 (2%) Strand=Plus/Minus Query 77757 TTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATA 77816 ||||| |||||||| || | ||||||||||| || |||||||| || || | Sbjct 7118 TTGATCGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTCGCCGAGTCCTTGTACAGGACG 7059 Query 77817 AACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTA-GCTTT 77875 || || | || || || ||||||| |||| ||| | | ||| | | ||| || || Sbjct 7058 AAGGGGTTGCCCGTCTCGATCTGTGCCTCGAGAATGGCATACCACA-GCTTCTGCGCCTT 7000 Query 77876 TATCATAGAT-TTGTATCGCCTCTCTCTTTCATATTGA--GTATATAGCCGTTCAAATTC 77932 | || || ||| || | ||| | || |||| ||| | ||| |||||||| Sbjct 6999 GA-CAGAGCGCTTGGCGCGGCCCTCGCGCTCGTATTTCTCGTAGAGAGCA--TCAAATTC 6943 Query 77933 ATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACC 77992 || || | || ||| || ||||| || |||||||||| |||||||| || Sbjct 6942 TTCGCCATAGCAGTCGGCCAGGCCGGGGCACTCGGCGGGGCACATCAGCGACCAGTCGCC 6883 Query 77993 ATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCG 78052 | | || || || ||| || | ||||| ||||| || || | || || || || Sbjct 6882 GTTCTGCTCGACGCGGCGCATGAACAAGTCAGGAATCCACAGCGCCAGGAACAGGTCGCG 6823 Query 78053 GGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGA 78112 | | || || || || || || ||||| | ||||| | | || || Sbjct 6822 CGCGCGCACCTCCTCCTTACCGTGGTTTTTGCGCAGATCAATGAACTCGAACACGTCCGA 6763 Query 78113 ATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTAT 78172 ||||| || || || || || || | | || || || || || || ||||| || | Sbjct 6762 GTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCCAC 6703 Query 78173 ATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATT 78232 || | || ||||| || || || | | ||| || | ||||||||| ||||| Sbjct 6702 GTAGCGCGCTGTGTTGTTGTATACGCGGAGCATGGGCACAATACCGTTGCTCACGCCATT 6643 Query 78233 TGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCC----CTATTC 78288 || || | ||| || || |||| || || || ||||||| | | || | Sbjct 6642 CGTACCGGCAATGTACGAGCCCGTTGCACGGATGTTG----TGGATATTCAGACCAATAC 6587 Query 78289 CTCCTGCCATCTTAGATATTAGAGCGCAACGT-TTCAATGTATCGTAGATACCCTCTATA 78347 | || ||| |||| || | ||||| ||| || | || |||||||||||||| ||| Sbjct 6586 CACCGGCCGTCTTGCTGATCATCGCGCA-CGTCTTGAGCGTGTCGTAGATACCCTCGATA 6528 Query 78348 CTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCA 78407 ||| ||| ||||| | | ||| || ||| |||||||| | | || || ||| Sbjct 6527 GAGTCGTCCTTCATGCTCACAAGGAAGCAGGACGACATTTGGGGGTTGGGCGTGCCAGCA 6468 Query 78408 TTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGA-AAGTAGATTGTATGTTTC 78466 || || | ||||| || || || ||||| || || || | |||| |||||||| || Sbjct 6467 TTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTCGGACATGTAG-TTGTATGTCTC 6409 Query 78467 AATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTG 78526 ||| || | | ||| || || || || || |||||||| | ||| ||||| Sbjct 6408 AATGGCGCTCTTCACATCCTCGCCGTGGATGCCCACAGCGACACGCATGAGCATGTGCTG 6349 Query 78527 AGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAA 78586 || | || | ||| ||| || || || ||| || |||| || || || Sbjct 6348 GGGGCGCTCCGCGACCTTGCCATTGATGCGCAGCAGGTAGGAGCGCTCCAGCGTCTTGAA 6289 Query 78587 ACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAAT 78622 || ||| ||||||| |||||| | ||||||||| Sbjct 6288 GCCGAAAAAGTTGTAGTGAAAGTCGCGCTCGTAAAT 6253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694666811510560