Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq14 95.1 2e-14 >seq14 Length=25249 Score = 95.1 bits (104), Expect = 2e-14 Identities = 349/539 (65%), Gaps = 6/539 (1%) Strand=Plus/Minus Query 76682 AGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCC 76741 ||||| | |||||| | | || || ||||| || || || || || || | |||| Sbjct 6788 AGATCAATGAACTCGAACACGTCCGAGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCG 6729 Query 76742 GGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATT 76801 || || || || || ||||| || | || | || ||||| || || || | | ||| Sbjct 6728 GGACGCTTGTTGCCACCCTGGTCCACGTAGCGCGCTGTGTTGTTGTATACGCGGAGCATG 6669 Query 76802 GGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATA 76861 || | ||| ||||| ||||| || || | ||| || || |||||| || Sbjct 6668 GGCACAATACCGTTGCTCACGCCATTCGTACCGGCAATGTACGAGCCCGTTGCACGGATG 6609 Query 76862 TTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGT-TTCAA 76920 || ||| || || || || || ||| | || ||| | || || ||| || | Sbjct 6608 TTGTGGATATTCAGACCAATACCACCGGCCGTCTTGCTGATCATCGCGCA-CGTCTTGAG 6550 Query 76921 TGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACAT 76980 ||||| ||||| ||||| ||| || ||| ||||| | | ||| || ||| ||||| Sbjct 6549 CGTGTCGTAGATACCCTCGATAGAGTCGTCCTTCATGCTCACAAGGAAGCAGGACGACAT 6490 Query 76981 TTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTC 77040 ||| | | || || ||||| |||| || || || || || || || || || Sbjct 6489 TTGGGGGTTGGGCGTGCCAGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTC 6430 Query 77041 AGAAA-GTAGATTGTATGTTTCAATAACTG-CTTCTATATCCCATTGATGAATTCCTACA 77098 || | |||| |||||||| ||||| | |||| | |||| || || || ||| Sbjct 6429 GGACATGTAG-TTGTATGTCTCAATGGCGCTCTTC-ACATCCTCGCCGTGGATGCCCACA 6372 Query 77099 GCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAG 77158 ||||||||||| | ||| ||||| || || || | ||| ||| || || || | Sbjct 6371 GCGACACGCATGAGCATGTGCTGGGGGCGCTCCGCGACCTTGCCATTGATGCGCAGCAGG 6312 Query 77159 TATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAAT 77217 || || |||| || || || || ||| ||||||| |||||| | |||||||| Sbjct 6311 TAGGAGCGCTCCAGCGTCTTGAAGCCGAAAAAGTTGTAGTGAAAGTCGCGCTCGTAAAT 6253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712932359225280