Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq102 150 1e-31 seq105 141 7e-29 seq27 127 1e-24 seq22 82.4 5e-11 >seq102 Length=51898 Score = 150 bits (166), Expect = 1e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | || ||| || || |||||||||||||| ||||||||||| || Sbjct 9027 CATACCACCACGCAGACGCAGCACGAGATGCAGCGTGCTCTCCTTCTGGATGTTGTAGTC 8968 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || || | || ||||||||||| || |||||||||| |||||| || || | Sbjct 8967 GCTCAGAGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGTTGGTCCGG 8908 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | ||| ||||| ||| ||||| ||| | | | || ||||| | ||||| Sbjct 8907 AGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGATTC 8848 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| | ||||||||||| || ||||||||||| || || |||||||| Sbjct 8847 CACCTCGAGGGTAATCGTCTTGCCAGTGAGGGTCTTTACAAAAATTTGCAT 8797 Score = 141 bits (156), Expect = 7e-29 Identities = 170/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | || ||| || || ||||| |||||||| ||||||||||| ||| Sbjct 9251 CCACCACGCAGGCGCAGCACGAGATGCAGCGTACTCTCCTTCTGGATGTTGTAGTCGCTC 9192 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || || | || ||||||||||| || |||||||||| |||||| || || | ||| Sbjct 9191 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGTTGGTCCGGAGGA 9132 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCA 44288 | || ||||| ||| ||||| ||| || ||| | || ||||| | ||||||| Sbjct 9131 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGT--CAATCGTGTCCGACGATTCCA 9074 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| | | ||||||||| || ||||||||||| |||||||| ||||| Sbjct 9073 CCTCGAGGGGAATCGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 9025 >seq105 Length=229645 Score = 141 bits (156), Expect = 7e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | || ||| ||||| |||||||||||||| ||||||||||| ||| Sbjct 227312 CCACCACGCAGGCGCAGCACGAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 227253 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || ||||||||||| || || ||||||| ||||| || || | || Sbjct 227252 AGGGTGCGACCATCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGTTGGTCCGGGGGG 227193 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | ||| ||||| ||| ||||| ||||| | | || ||||||| || |||||| Sbjct 227192 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 227133 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || | || |||||||| || || |||||||| ||||| | ||||||| Sbjct 227132 TCAAGGGTGATCGTCTTCCCGGTCAGGGTCTTGACGAACACTTGCATG 227085 >seq27 Length=62815 Score = 127 bits (140), Expect = 1e-24 Identities = 157/213 (74%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || ||||||||||| ||||||||||| ||| || ||| |||| || Sbjct 52881 CACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCCTC 52940 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || || |||| |||||| || || | ||| | || ||||| ||| Sbjct 52941 GAGCTGCTTACCAGCGAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTATCCTG 53000 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| || ||| | || ||||| | || || ||||| | || |||||| Sbjct 53001 GATCTTGGCCTTGACATTGT--CGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTC 53058 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || || || ||||| ||||||||||||||| Sbjct 53059 TTGCCAGTCAGAGTCTTGACGAAGATTTGCATG 53091 >seq22 Length=101165 Score = 82.4 bits (90), Expect = 5e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| |||||||||||||||||||| ||||| ||| | ||| | || ||| Sbjct 10458 ACGAGGTGCAGCGTGCTCTCCTTTTGGATATTGTAGTCGCTCAAAGTACGCCCATCCTCC 10517 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || ||||| |||| |||||||| || | || | || ||||| ||| Sbjct 10518 AGCTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGG 10577 Query 44249 ATCTT 44253 ||||| Sbjct 10578 ATCTT 10582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989395289293