Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq63 102 2e-16 seq40 84.2 5e-11 >seq63 Length=730213 Score = 102 bits (112), Expect = 2e-16 Identities = 363/564 (64%), Gaps = 15/564 (3%) Strand=Plus/Minus Query 319470 GGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCT- 319528 ||| || || ||| ||||||| ||||||||| |||||||| | ||| | || Sbjct 515052 GGTACACACGTCGTTGAGGAACTTGGAGTCGTGCGACACAATGAT---CGAGGTGGTCTG 514996 Query 319529 --TAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGT 319586 ||||| | | ||||| || | | |||| | ||||| || ||||||||| || Sbjct 514995 GGTAAGGCCGTTGAGGTAGTCGGTGATCCACTTGACGTTGATGACGTCAAGATGGTTAGT 514936 Query 319587 CGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTT 319646 ||||| ||||| ||||| | | || | ||||| ||||| ||||| ||||| || Sbjct 514935 AGGCTCATCAAGCAGCAGAATGTCGGCACGGAAGAGCACGGCACGGGCAAGGGCGAGCTT 514876 Query 319647 CATTTTCCACCCTCCGGAAAGAGTGTTAATTGGGGCAGATTGGCGCTCAATATCAAAGCC 319706 ||| ||||| || || || || | | || ||| ||| ||||||| || ||||| Sbjct 514875 CATCTTCCAACCACCCGAGAGGGCAGTGATGGGGCCAGCCTGGCGCTGGTCGTCGAAGCC 514816 Query 319707 AACCGATTCTAGAGTAGTTACGATCTTTTCACGAGACCAAATGTTTTCCTTTACTTGTTC 319766 | | | || || | | | ||||| | || || | || | | Sbjct 514815 CATCTCCTTGAGGGTGGCGGCAGCCGACTCACGGGT---AACGT----CGAGAC--GCTT 514765 Query 319767 ATCATTGGCAATGAAGTCAATGATAGCCGTGTTAGAATCGGACCCGTCGAGATCGTGTTC 319826 ||| | | || ||||| | || | ||| | || || |||||||| ||||| || Sbjct 514764 GTCAGCGACGATAAAGTCGAGAATCGAGATGTCACCCTCCGAGCCGTCGAGGTCGTGCTC 514705 Query 319827 CACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGGCCGTTCACAAT 319886 ||||| || | | || | |||||||| || || | |||||||||| || Sbjct 514704 GACGTACCAGGTGCGGACCTCGTCAGGCGAGGGGAAGCCCTCGACCTGGCCGTTCTGGAT 514645 Query 319887 AGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCC 319946 |||||||| ||||| || ||||||| ||||| | || || ||||||||||||| || Sbjct 514644 GGCGCGCATGAGGGTAGACTTACCCGAACCGTTACGACCGCAAAGACCGTAGCGGTGGCC 514585 Query 319947 GCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAA 320006 || || || || | ||||||| ||||| || |||| || || || || || Sbjct 514584 ACGCTTAAGACGGAGAGTAGCAGTGTTCAGCAGAATCTTGGCACCGTAGGCGAGCGAGAA 514525 Query 320007 TTCACAATCACACAGATCCTCACC 320030 | || | || || |||||||| Sbjct 514524 CTGGCAGTTGCAGAGGTCCTCACC 514501 >seq40 Length=46956 Score = 84.2 bits (92), Expect = 5e-11 Identities = 152/218 (70%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGT--GACGCTATTCCA-TGT 230442 ||||| || || || || || | || |||| || ||||| ||||| | || ||| Sbjct 42223 ATCATCACCGAGGCCGTGGAGATTGAGCAGGACTT--TTTGTCGGACGCGCTGCCGGTGT 42280 Query 230443 CGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGC 230502 ||| | || ||||||||||| || ||| | |||||||| || || || || ||||| Sbjct 42281 CGC-TGATCGGCATGAACGCGCGGCTGATGTGCCAGTACATTGAGTTTGTCGCAGACCGG 42339 Query 230503 ATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATG 230562 | | || || || || || ||| ||| || | |||||||| || | |||||| Sbjct 42340 CTGCTGGTGGCGCTCGGGAACCCGAAGCACTACCACGCAAAGAACCCATTCGACTTTATG 42399 Query 230563 GAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGA 230600 ||| ||||||||| || || ||| | ||||| ||||| Sbjct 42400 GAGAACATTTCGCTGCAGGGCAAGTCGAACTTTTTCGA 42437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057822969943880