Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq30 163 3e-35 >seq30 Length=147637 Score = 163 bits (180), Expect = 3e-35 Identities = 354/527 (67%), Gaps = 31/527 (6%) Strand=Plus/Minus Query 145764 GGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCAT 145823 ||||| ||| | || ||||| || ||||| || | ||||||||||| || || || | Sbjct 100352 GGCGATCATATGAGTAAGCAGTGAATAGCTCGCAACATTGAAGGGCACACCAAGGCCGAG 100293 Query 145824 GTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAG------CTCCCCGCC------------ 145865 || | |||||||||||||| ||||| || || || ||||| Sbjct 100292 ATCACACGAGCGCTGGTACATTTGGCACGACAGTTGGGGCTTGCCGCCATCGACAGGTGG 100233 Query 145866 CGC---CACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTC 145922 ||| ||| ||||||||||||| | |||||||||||||| ||||| || ||| Sbjct 100232 CGCACTCACATAGAACTGGCACATCACATGGCAGGGCGGCAGAGCCATAAGATCCATGTC 100173 Query 145923 CGCCGGGTTCCAGGCGG---TGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCT 145978 || |||||||| || | |||||| | | | | || | || || |||||||| Sbjct 100172 TGCTGGGTTCCACGCCGACATGAGGATGCGGC----GGTCATTTGGATTGTTCTTGATCG 100117 Query 145979 CCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCA 146038 | | |||| | ||||||||| || ||||| || || ||| | | |||| Sbjct 100116 TCTCGATCACCTGGGCGAGCTGGTCGACTCCCTGTCCGGCATAGTCTACATCAGCGTCCT 100057 Query 146039 CGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTC-CCCGGGC 146097 |||| ||| || ||||||| ||||||||| || || || || || || || ||| || Sbjct 100056 GGTACTTGGCGCCAAAGTGCCGCCACTGGAAGCCATACACCGGACCGAGATCTCCCTCGC 99997 Query 146098 TCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATC 146157 | |||||| || ||| | | || || ||| || |||||| |||||||||| Sbjct 99996 -GGCGGTGCCCGAGACCGCGCTTCTCCAGAAACTCCTTTGAGCCGTTGCCGTCCCAGATG 99938 Query 146158 TTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGC 146217 | || || | | | | ||| | ||||| ||||||||| |||||||||| || ||| Sbjct 99937 TGCACACCGCGCTCAGCAAGCAGTCTAGAGTCAGTGGACCCCTTGATGAACCACAGAAGC 99878 Query 146218 TCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 || ||| ||| || | |||| |||| ||||||||| | ||||| Sbjct 99877 TCCTCGGCGACTCCACGGAAGAACACCCGCTTGGTGGTAAAAAGGGG 99831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076239427040