Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq40 461 8e-125 seq2 143 3e-29 seq39 131 2e-25 seq58 120 3e-22 seq75 118 1e-21 >seq40 Length=46956 Score = 461 bits (510), Expect = 8e-125 Identities = 617/851 (73%), Gaps = 13/851 (2%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||||| |||| ||| || || ||| | ||||| || | |||| || Sbjct 41554 GAGCCGCTGCTGGTCGAGTCGAACCGGCGCTTTGTGCTGTTCCCGATCCGGTACCACGAG 41613 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| | ||||| ||||||||||||||||||||||||| ||||||| | |||||| Sbjct 41614 ATCTGGCAGTTCTACAAGAAGGCCGAGGCGTCGTTCTGGACCGCCGAGGAGATCGACCTG 41673 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||| | ||||||||| || |||||||||| |||||||| || |||| Sbjct 41674 AGCAAGGACCTGCACGACTGGGACAACCGGCTGAACGACAATGAGCGCCACTTTATCAGC 41733 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || |||||||| || || ||||| |||||||| || |||||||| ||| | ||||| Sbjct 41734 CATGTGCTGGCGTTCTTTGCCGCGTCGGACGGCATTGTGAACGAGAACCTGCTGGAGCGC 41793 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | |||||||||| ||||||||||| |||||||||||||| |||||| ||| Sbjct 41794 TTCTCGACCGAGGTGCAGGCCGCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGATG 41853 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAG 116932 ||||| | |||||||| | ||| ||| || ||||||||||| | ||| | ||| Sbjct 41854 GAGAATATCCACTCGGAGACGTACTCGCTGCTGATCGACACGTATATCCGCGAGCCCGAG 41913 Query 116933 GAGA---AGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 || || || |||| |||| ||||||||||| ||| || || ||||||| Sbjct 41914 CAGCGCGAGTACC---TGTTTGACGCGATCGAGACGATCCCGGTGGTGAAGAAGAAGGCG 41970 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049 |||||||||||||| |||||| || | | || |||| |||||||||||||| Sbjct 41971 GAGTGGGCGCTGCGGTGGATCAACGACCGCCGCGCGAGCTTCTCGGAGCGCCTGGTGGCG 42030 Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109 ||||||||||| |||||| |||||||||| || || || | || |||||||| ||| Sbjct 42031 TTCGCGGCCGTGGAGGGCATCTTCTTTTCCGGATCGTTTGCGTCGATCTTTTGGCTGAAG 42090 Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 || || ||||| ||||| || ||| | ||| |||||||| ||||| |||||||||| Sbjct 42091 AAGCGTGGCCTGATGCCTGGTCTGTCGTTCTCGAACGAGCTGATCTCGCGGGACGAGGGA 42150 Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCG-AGCGCGGC 117228 ||||| |||||||| || ||||||||| || || | |||| || | | | || Sbjct 42151 CTGCACACTGACTTTGCATGCCTGCTGTTCAGCCACCTGAAGAAGCGGGCGCACCCCAGC 42210 Query 117229 GCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGC 117288 || || || |||| ||||||| || || | || |||||| ||| | | || || Sbjct 42211 ACG-ATCGAGGCGATCATCACCGAGGCCGTGGAGATTGAGCAGGACTTTTTGTCGGACGC 42269 Query 117289 GCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCG 117347 |||||||||| ||| | || | || ||| | ||||| || ||||| ||||| | Sbjct 42270 GCTGCCGGTGTCGCTGATCGGCATGAA-CGCGCGGCTGATGTGCCAGTACATTGAGTTTG 42328 Query 117348 TCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGC 117407 |||| ||| |||||||| | | ||| | | | ||||||||| || | ||||| Sbjct 42329 TCGCAGACCGGCTGCTGGTGGCGCTCGGGAACCCGAAGCACTACCACGCAAAGAACCCAT 42388 Query 117408 TGGACTTTATG 117418 | ||||||||| Sbjct 42389 TCGACTTTATG 42399 >seq2 Length=94478 Score = 143 bits (158), Expect = 3e-29 Identities = 163/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||| | ||||| || || |||||||| || || |||||| | || || || | || Sbjct 13304 ATGCAAGTCTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTTGAGGTGGAGTCTTCC 13245 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| ||| || | ||||| ||||| |||||| ||||||| Sbjct 13244 GACACTATCGAGAACG-TCAAGGGAAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 13186 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || |||| || ||||| ||||| || || | |||||||| | ||||||||| Sbjct 13185 ACAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTAGCGACTACAA 13126 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| ||| || || || ||| |||| Sbjct 13125 CATCCAGAAGGAGAGCACTCTCCACCTTGTGCTGCG 13090 >seq39 Length=522589 Score = 131 bits (144), Expect = 2e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || ||||| || || || || || || ||||| |||| ||||| || | Sbjct 29573 AATGCAAATCTTTGTAAAGACTCTTACTGGAAAGACTATCACGCTCGAAGTCGAGTCCTC 29632 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | |||| ||||| || || | ||||| |||||||| || |||||| Sbjct 29633 GGACACAATCGACAACG-TCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACC 29691 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 | || || || |||| || ||||| ||||| || |||| ||||| |||| |||||||| Sbjct 29692 AACAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACGCTCAGCGACTACA 29751 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||| ||| || || || || Sbjct 29752 ACATCCAGAAGGAGAGCACTCTTCACCTTGT 29782 Score = 129 bits (142), Expect = 6e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| | ||||| || || || || ||||| || ||||| |||| ||||| || | Sbjct 30030 ATGCAGGTGTTCGTCAAGACCCTTACTGGCAAGACTATCACGCTCGAAGTCGAGTCCTCG 30089 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | ||||| ||||| || || | ||||| |||||||| || ||||||| Sbjct 30090 GACACAATCGAAAACG-TCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 30148 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || |||| || ||||| ||||| || |||| ||||| |||| ||||||||| Sbjct 30149 ACAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACGCTCAGCGACTACAA 30208 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| ||| || || || || Sbjct 30209 CATCCAGAAGGAGAGCACTCTTCACCTTGT 30238 Score = 125 bits (138), Expect = 7e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| | || || || || ||||| ||||| || ||||| | || |||||| | | Sbjct 29802 ATGCAGGTCTTTGTCAAGACCCTCACTGGCAAGACGATCACTCTGGAAGTCGAATCGTCT 29861 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | ||||| ||||| || || | ||||| ||||| |||||| ||||||| Sbjct 29862 GACACGATCGAAAACG-TCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 29920 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || |||| || || || |||||||| |||| || || || | |||||||| Sbjct 29921 ACAGCGTCTTATCTTTGCCGGTAAGCAGCTGGAGGACGGTCGTACTCTGAGTGACTACAA 29980 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||| |||||| ||||| ||| Sbjct 29981 CATCCAGAAGGAGAGCACGCTCCATCTCGTG 30011 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| | || || || || || || ||||| || ||||| |||| || || || | Sbjct 30258 ATGCAGGTCTTTGTCAAGACCCTTACTGGCAAGACTATCACGCTCGAAGTTGAGTCCTCG 30317 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | ||||| ||||| || || | ||||| ||||| |||||| ||||||| Sbjct 30318 GACACGATCGAAAACG-TCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 30376 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || |||| || ||||| |||||||| |||| || || || | |||||||| Sbjct 30377 ACAGCGTCTTATCTTTGCCGGCAAGCAGCTGGAGGACGGCCGTACTCTGAGTGACTACAA 30436 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| |||||| || || || Sbjct 30437 CATCCAGAAGGAGAGCACGCTCCACCTTGT 30466 >seq58 Length=446738 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| || ||||| | || ||||| | | | Sbjct 376040 ATGCAGATCTTCGTCAAGACACTCACGGGCAAGACGATCACTCTTGAGGTCGAGTCGAAC 376099 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | ||||| || |||| ||||| ||||| || || ||||||| Sbjct 376100 GACACGATCGACATCGTCAAGTCTAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAA 376159 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | || | ||| ||||| ||||| || |||| ||||| || | |||||||||| Sbjct 376160 CAGCGGTTGATTTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTTAGCGACTACAAC 376219 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| ||| || || || || Sbjct 376220 ATCCAGAAGGAGAGCACTCTCCACCTCGT 376248 >seq75 Length=115788 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| | || || || || || || ||||| || ||||| |||| ||||| || || Sbjct 54774 ATGCAGGTCTTTGTCAAGACTCTTACCGGCAAGACAATCACTCTCGAGGTCGAGTCCTCC 54715 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | ||||| || || | ||||| |||||||| ||| |||| || Sbjct 54714 GATACCATTGACATCGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAA 54655 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || ||||| || || || || | |||||||||| ||||| || Sbjct 54654 CAGCGTCTGATCTTTGCAGGCAAGCAACTAGAGGATGGCCGCACCCTCAGTGACTATAAT 54595 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||||| |||||| ||||||||| Sbjct 54594 ATCCAGAAGGAGAGCACGCTCCATCTAGTG 54565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218710541760