Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq40 127 2e-24 seq39 104 2e-17 seq58 100 2e-16 seq75 96.9 3e-15 seq2 89.7 4e-13 >seq40 Length=46956 Score = 127 bits (140), Expect = 2e-24 Identities = 295/440 (67%), Gaps = 11/440 (3%) Strand=Plus/Plus Query 44862 TGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTTGCGGCGATATTTT 44921 |||| || ||||| || || || | |||||||| || |||||| |||| |||| Sbjct 42023 TGGTGGCGTTCGCGGCCGTGGAGGGCATCTTCTTTTCCGGATCGTTTGCGTCGATCTTTT 42082 Query 44922 ACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAATTGATTTCGAGAG 44981 |||| | || ||||||| || ||| |||| ||||| |||| ||| | | Sbjct 42083 GGCTGAAGAAGCGTGGCCTGATGCCTGGTCTGTCGTTCTCGAACGAGCTGATCTCGCGGG 42142 Query 44982 ACGAAGGTCTGCACACCAACTTTGCCTGCCTCTACTATAATACGAGAGTCGATCAAAAGT 45041 |||| || |||||||| ||||||| ||||| || | | | | || | ||| Sbjct 42143 ACGAGGGACTGCACACTGACTTTGCATGCCTG--CTGT--TCAGCCACCTGA--AGAAGC 42196 Query 45042 TGGACGCGCCC----ACCGTCAACGACATGTTCTCCGAAGCCGTGGCCATCGAGATGGAA 45097 || ||| ||| || || | | || || |||| ||||||| || ||| ||| Sbjct 42197 GGG-CGCACCCCAGCACGATCGAGGCGATCATCACCGAGGCCGTGGAGATTGAGCAGGAC 42255 Query 45098 TTTTTTGCTGAGGCTCTGCCCGAATCGTTGGTGGGAATGAACGCGAATATGATGAGAAAG 45157 ||||| | || || ||||| | ||| || | || ||||||||| ||||| | || Sbjct 42256 TTTTTGTCGGACGCGCTGCCGGTGTCGCTGATCGGCATGAACGCGCGGCTGATGTGCCAG 42315 Query 45158 TACATTGAGTTTGTCGCCGATCGTCTTCTCGTCCAGTTAAAGTATCCCAAGATGTACTAT 45217 ||||||||||||||||| || || || || || | | | | || ||| ||| | Sbjct 42316 TACATTGAGTTTGTCGCAGACCGGCTGCTGGTGGCGCTCGGGAACCCGAAGCACTACCAC 42375 Query 45218 ACTGAGAACCCATTCGAGTTTATGAACAATATTTCGTTGGAGGGCAAAACTAAttttttt 45277 | ||||||||||||| |||||| | || |||||| || ||||||| | || ||||| Sbjct 42376 GCAAAGAACCCATTCGACTTTATGGAGAACATTTCGCTGCAGGGCAAGTCGAACTTTTTC 42435 Query 45278 GAGAAACGCGTCGGCGAATA 45297 ||| || || ||||| || Sbjct 42436 GAGCGTCGGGTGGGCGACTA 42455 >seq39 Length=522589 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || |||||||| ||||| | ||||| ||||| ||||| || || || | Sbjct 29765 CTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAA 29706 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| || ||||| || || ||||| |||||||||||||| || || || || | Sbjct 29705 GATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTT 29646 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||||| | |||||| |||| || | || || || || ||||| ||||| Sbjct 29645 GTCGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGTCTTTCCAGTAAGAGTCTTTAC 29586 Query 118727 AAAAATCTGCAT 118738 ||| || ||||| Sbjct 29585 AAAGATTTGCAT 29574 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || |||||||| ||||| | ||||| ||||| ||||| || || || | Sbjct 30221 CTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAA 30162 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| || ||||| || || ||||| |||||||||||||| || || || || | Sbjct 30161 GATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTT 30102 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 ||||| ||||||| | |||||| |||| || | || ||||| || || || || || Sbjct 30101 TTCGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGTCTTGCCAGTAAGGGTCTTGAC 30042 Query 118727 AAAAATCTGCAT 118738 || | |||||| Sbjct 30041 GAACACCTGCAT 30030 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || |||||||| || |||| ||| || ||||| ||||| || || || | Sbjct 30449 CTCCTTCTGGATGTTGTAGTCACTCAGAGTACGGCCGTCCTCCAGCTGCTTGCCGGCAAA 30390 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| |||||||| || || || || || ||||||||||| || || || || | Sbjct 30389 GATAAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTT 30330 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 ||||| ||||||| | ||| || |||| || | || ||||| || || || || || Sbjct 30329 TTCGATCGTGTCCGAGGACTCAACTTCGAGCGTGATAGTCTTGCCAGTAAGGGTCTTGAC 30270 Query 118727 AAAAATCTGCAT 118738 ||| | |||||| Sbjct 30269 AAAGACCTGCAT 30258 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || |||||||| || |||| ||| || ||||| ||||| || || || | Sbjct 29993 CTCCTTCTGGATGTTGTAGTCACTCAGAGTACGACCGTCCTCCAGCTGCTTACCGGCAAA 29934 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| |||||||| || || || || || ||||||||||| || || || || | Sbjct 29933 GATAAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTT 29874 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 ||||| ||||| | ||||| || | || | ||| ||||| || || || || || Sbjct 29873 TTCGATCGTGTCAGACGATTCGACTTCCAGAGTGATCGTCTTGCCAGTGAGGGTCTTGAC 29814 Query 118727 AAAAATCTGCAT 118738 ||| | |||||| Sbjct 29813 AAAGACCTGCAT 29802 >seq58 Length=446738 Score = 100 bits (110), Expect = 2e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || |||||||| ||||| | |||||| ||||||||||| || || ||| | Sbjct 376231 CTCCTTCTGGATGTTGTAGTCGCTAAGAGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 376172 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 || | ||||| || || ||||| || ||||||||||| ||| || || || Sbjct 376171 AATCAACCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTAGACTTGACGAT 376112 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||| | ||||||||| | || | ||| ||||| || || || || || Sbjct 376111 GTCGATCGTGTCGTTCGACTCGACCTCAAGAGTGATCGTCTTGCCCGTGAGTGTCTTGAC 376052 Query 118727 AAAAATCTGCATGGC 118741 || ||||||||||| Sbjct 376051 GAAGATCTGCATGGC 376037 >seq75 Length=115788 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || || || || || || | ||||| |||||| || || || || || | Sbjct 54583 CTCCTTCTGGATATTATAGTCACTGAGGGTGCGGCCATCCTCTAGTTGCTTGCCTGCAAA 54642 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGTTTAACCT 118665 ||| |||||||| ||||| || || ||||||||||||| ||| | || | || | | Sbjct 54643 GATCAGACGCTGTTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGAT 54702 Query 118666 GTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 118725 | || | ||| || | | ||||||||||| || | || |||||||| ||||| || | Sbjct 54703 G-TCAATGGTATCGGAGGACTCGACCTCGAGAGTGATTGTCTTGCCGGTAAGAGTCTTGA 54761 Query 118726 CAAAAATCTGCATGG 118740 |||| | |||||||| Sbjct 54762 CAAAGACCTGCATGG 54776 >seq2 Length=94478 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||| | ||||| || ||| || || |||||||| ||||| | ||||| ||| Sbjct 13092 CAGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTAAGGGTGCGGCCATC 13151 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||||||||| || || || |||| || ||||| || || || || || ||||||||||| Sbjct 13152 CTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTC 13211 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 || ||| || || | |||| ||||| | ||| ||||| | ||| | || Sbjct 13212 CTGGATCTTTCCCTTGACGTTCTCGATAGTGTCGGAAGACTCCACCTCAAGGGTGATAGT 13271 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 || || || || || || || || | ||||||||| Sbjct 13272 CTTCCCCGTGAGGGTCTTGACGAAGACTTGCATGGCT 13308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829998164592