Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq67 125 2e-23 seq40 104 5e-17 >seq67 Length=473897 Score = 125 bits (138), Expect = 2e-23 Identities = 204/289 (71%), Gaps = 10/289 (3%) Strand=Plus/Minus Query 254099 GCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGAT 254158 ||||||||||||||||||||| ||||| || || || | | || || ||||||||||| Sbjct 356882 GCGCGTGCTCGAGCTGAACGCGTCTGATGAGCGTGGCATCGCGGTGGTGCGCGACAAGAT 356823 Query 254159 CAAG-ACTTTCTCCAAGATG------TCGATTTCGTCGTTCCAACCCGGC-TGTCCGCCT 254210 |||| ||||| ||||| | || | | || || | || | | || ||||| Sbjct 356822 CAAGCACTTTG-CCAAGCTTGCCGTCTCTAATCCGGCGC-CTGGCCAGACGTGCCCGCCG 356765 Query 254211 TTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTC 254270 |||||| | | |||||||||||||| |||| ||||||| || || ||| ||| || Sbjct 356764 TTCAAGATTATCATCCTGGACGAGGCTGACAGCATGACGCAGGATGCACAGGGCGCGCTG 356705 Query 254271 CGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTG 254330 || || | |||||| | || | | ||||| || ||||| | |||||||||||| Sbjct 356704 CGTCGCATCATGGAGCAGTACAGCCGCATCACGCGCTTCTGCCTCATCTGCAACTACGTG 356645 Query 254331 TCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 || || |||| ||||| || || || ||| |||||| || |||| Sbjct 356644 ACGCGCATTATCGAGCCGCTTGCGTCGCGCTGCAGCAAGTTCCGCTTCA 356596 >seq40 Length=46956 Score = 104 bits (114), Expect = 5e-17 Identities = 592/929 (64%), Gaps = 36/929 (4%) Strand=Plus/Minus Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | || || | |||||| || || ||| || ||||| || ||| | |||||| Sbjct 31301 TACAACTTTTTCGGTTTCAAGACTCTTGAGCGCTCTTATCTGCTGCGCATTAACGGCAAG 31242 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGAT--G 248935 | | || || ||||||||| | ||||| || || ||||| || ||| || | | Sbjct 31241 GTTGCCGAGCGCCCCCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCAC--GGCTCGG 31184 Query 248936 ACATAGAGAGCGTGCTCGAGACGTACACCGGAATGA--GTGAACGCTGGATGACACATGC 248993 |||| ||| || | | |||||||||| | ||| | ||| || | || ||||| Sbjct 31183 ACATTGAGGCCGCGATTGAGACGTACAACTACATGTCGGAGAAGGCCT--TTACTCATGC 31126 Query 248994 CACACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCT 249053 | || || ||||||||||| || ||| ||| ||| || |||||||| || | Sbjct 31125 GTCGCCCACTCTCTTCAACGCAGGCACCCCGAACCCGCAGATGTCGTCGTGCTTCCTCGT 31066 Query 249054 TGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAA-ACAGACGGCGAAGA 249112 |||| | |||||||| |||| ||||| || ||||| || || || | || | || Sbjct 31065 GTGCATGAAGGACGACTCGATCGAGGGCATCTACGACACACTCAAGACCTGC-GCCATGA 31007 Query 249113 TTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGT 249172 | || ||||| || || |||||| | || | |||||| || | || |||| Sbjct 31006 TCAGCAAGACGGCGGGTGGCATTGGTCTCAACATCCACTGCATCCGTGCCACTGGCTCGT 30947 Query 249173 ACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGT 249232 |||| || || || || || || | || || || ||| | || || | | Sbjct 30946 ACATTGCCGGCACGAACGGCGTGAGCAACGGCATTGTGCCCATGCTCCGCGTGTACAACA 30887 Query 249233 CCACCGCCAGGTTCATCAACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGT 249286 ||| ||| | | | || |||||| ||| ||||| || | || || | | Sbjct 30886 ACACTGCCCGCTACGTCGACCAGGGCGGCAACAAGCGCC---CCGGTGCCTTTGCTGTCT 30830 Query 249287 ATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCA 249346 | | || |||||||| || | || |||||| | || || |||||| |||||| Sbjct 30829 ACCTCGAGCCCTGGCACGCTGACGTGTTTGAGTTCATCGATCTGCGCAAGAACCACGGCA 30770 Query 249347 ACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGC 249406 | ||| | | || |||||||| ||||| | || ||| || | || |||||||| Sbjct 30769 AGGAGGAGGTCCGTGCCCGTGACCTGTTCTATGCGCTCTGGATCCCTGATCTGTTCATGA 30710 Query 249407 GCCGCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTCA 249466 || ||| || ||| || ||| |||| | | || |||| ||||| | ||| Sbjct 30709 AGCGTGTCGAGAAGAACGAAGACTGGTCGCTCATGTGCCCCGCCGAGGCCCCCGGTCTC- 30651 Query 249467 TCGATCTAC-ACGGCGCCGACTTCGACCAAGCCTATAAGAAATACGAATCCAACGGCATC 249525 || || | ||||| || ||||| | ||| || ||||| | | || | Sbjct 30650 TCTGACTGCTACGGCAAGGAGTTCGAGGAGCTCTACGAGCGGTACGAGCGCGAGGGACGC 30591 Query 249526 GGCAAG---ACAATCAAGGCTCGGACCCT-TTTTGCGAAGGTGGTGGAGTCCCAGATAGA 249581 | |||| || ||||||| | | || | | || | | | ||| ||||||| || Sbjct 30590 GCCAAGCGCACTGTCAAGGCGCAAAAGCTGTGGTACG-CGATCCTCGAGGCCCAGATCGA 30532 Query 249582 GACAGGGGGGCCGTATTATT-TGTTCAAAGACGCGTGC-AACGCCAAGAGTAACCAACGG 249639 ||| ||| || ||||| ||| ||| || || ||| ||| |||||| |||||| | Sbjct 30531 GAC-GGGCAACCCCTTTATTCTGTACAAGGATGC-TGCGAACAGCAAGAGCAACCAAAAG 30474 Query 249640 CATCTTGGTACCATCCGCTCGTCAAATCTCTGTGCAGAGGTGATTCAATA---CTCGTCC 249696 | || || ||||||||| || || || || ||||| | || | || |||| || Sbjct 30473 AACCTCGGCACCATCCGCAGCTCGAACCTGTGCACAGAGATTATCGAGTACAGCTCGCCC 30414 Query 249697 AAGGAGGAGATTGCCGTCTGCAACCTGGC 249725 || |||| ||||| |||||||| || Sbjct 30413 ---GACGAGACCGCCGTGTGCAACCTCGC 30388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765354419968