Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq58 145 6e-30 seq2 127 2e-24 seq39 116 3e-21 >seq58 Length=446738 Score = 145 bits (160), Expect = 6e-30 Identities = 155/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || |||||||||||||| |||||||||||| | || |||| |||| || || || Sbjct 376243 GTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTAAGAGTGCGACCGTCCTCGAGCTG 376184 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| ||||||||||||||||| ||||| | ||||||||||||| ||| || Sbjct 376183 CTTGCCGGCGAAAATCAACCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTT 376124 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | |||| ||| ||||| | || |||||||||||||| Sbjct 376123 AGACTTGACGATGTCGATCGTGTCGTTCGACTCGACCTCAAGAGTGATCGTCTTGCCCGT 376064 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || ||||| |||||| Sbjct 376063 GAGTGTCTTGACGAAGATCTGCATG 376039 >seq2 Length=94478 Score = 127 bits (140), Expect = 2e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || |||||||||||||| |||||||||||| | || ||| | || || || || Sbjct 13101 GTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTAAGGGTGCGGCCATCCTCGAGCTG 13160 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || |||| ||||||||||| || || | ||||||||||||| || || Sbjct 13161 CTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTT 13220 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 | ||| || | | | |||| | ||||||||| | ||| || ||||| ||||| Sbjct 13221 TCCCTTGACGTTCTCGATAGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTCCCCGT 13280 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || |||| ||||||| Sbjct 13281 GAGGGTCTTGACGAAGACTTGCATG 13305 >seq39 Length=522589 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || |||||||||||||| |||||||||||| | || ||| |||| || || || Sbjct 29777 GTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCAAGCTG 29718 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || |||| ||||||||||| ||||| | |||||||||||| || || Sbjct 29717 CTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTT 29658 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | ||||| ||| || || | || || ||||| || || Sbjct 29657 GCTCTTGACGTTGTCGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGTCTTTCCAGT 29598 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 |||||||| |||||||||||||| Sbjct 29597 AAGAGTCTTTACAAAGATTTGCAT 29574 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || ||||||||||||||||| ||||||||||| |||| ||| |||| ||||| || Sbjct 30004 TGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCACTCAGAGTACGACCGTCCTCCAGCTGC 29945 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || ||||| || || | ||||||||||| || || | ||||||||||||| || || Sbjct 29944 TTACCGGCAAAGATAAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTG 29885 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | |||| || || |||| || ||||||||||| || Sbjct 29884 CTCTTGACGTTTTCGATCGTGTCAGACGATTCGACTTCCAGAGTGATCGTCTTGCCAGTG 29825 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 || ||||| ||||||| ||||| Sbjct 29824 AGGGTCTTGACAAAGACCTGCAT 29802 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||||||||||||||| ||||||||||| |||| || |||| ||||| || Sbjct 30461 GTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCACTCAGAGTACGGCCGTCCTCCAGCTG 30402 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || || | ||||||||||| || || | ||||||||||||| || || Sbjct 30401 CTTGCCGGCAAAGATAAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTT 30342 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | ||||| ||| || || | || || |||||||| || Sbjct 30341 GCTCTTGACGTTTTCGATCGTGTCCGAGGACTCAACTTCGAGCGTGATAGTCTTGCCAGT 30282 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| ||||||| ||||| Sbjct 30281 AAGGGTCTTGACAAAGACCTGCAT 30258 Score = 98.7 bits (108), Expect = 8e-16 Identities = 89/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || |||||||||||||| |||||||||||| | || ||| |||| || || || Sbjct 30233 GTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCAAGCTG 30174 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || ||||| || |||| ||||||||||| ||||| | |||||||||||| Sbjct 30173 CTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 30122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074834061596