Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq40 459 2e-124 seq39 87.8 2e-12 >seq40 Length=46956 Score = 459 bits (508), Expect = 2e-124 Identities = 1452/2223 (65%), Gaps = 65/2223 (3%) Strand=Plus/Plus Query 22112 ACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTCTTC 22171 || || ||||| || ||||| ||||| || ||| || || || || | || ||||| Sbjct 29467 ACAGTGAACTGGATCGCGTTGGCGGCAGGGCGGGTACGCAGGTAGTAGCTTCCAGTCTTG 29526 Query 22172 AGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAAGTCC 22231 |||||| ||||||| ||||||| || |||||||| | | ||| | | ||| | | Sbjct 29527 AGACCCTTCTTCCAGCCGTAAAAGTGCATCGACGTAAGCTGGCCAAACGTAGGCGCGCTC 29586 Query 22232 ATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATATTT 22291 | || | |||| ||| ||||| ||| || || || || ||||||||||| | Sbjct 29587 AGGTGAATGTTGAGACTCTGGCTCTGGCAGATGAATGCACCGCGGTCGGCGGCCATGTCG 29646 Query 22292 ATCAATGTACGCATCGAC--ATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAACG 22349 || |||| || | | | || ||||| ||||||||||| || | ||||| | || Sbjct 29647 AT-AATG-ACCTTTTGGCTGATCTCCCACACGGTCTTGTAGAGCGCCTTGATC-CGGTCG 29703 Query 22350 G---TATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA---A 22403 | ||||| ||| |||||| || || | |||| ||||| | | | Sbjct 29704 GGAATATCGGG--GATGTTCTGGATAGAGCC---ACTGTGCGCGATCAGACGCTCGCGCA 29758 Query 22404 TCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTT 22463 | ||||||||||||| || | || | || || ||| |||||||||| | Sbjct 29759 TGGTATCGTTCCACAGGCCCAGCTCGACAAGCTCGCGGAGCAGCCACGGGTTCACCACCT 29818 Query 22464 GAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATT 22523 | |||||||||| | || ||||| |||||||||| ||| | || || || | | Sbjct 29819 GGAACTCGCCGGCGAGCACACGGCGCATGTAAATGTTGCTGGTGTATGGCTCAAAGCACT 29878 Query 22524 CATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGT 22583 | || || || ||||| ||||| ||||| |||||||| || | ||| ||||||| Sbjct 29879 CGTTAAAGCCGAGAATCTGGCTCGTCGACGCGGTGGGCATCGGGGCGAGCAGCAGCGAGT 29938 Query 22584 TTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACG 22643 | | || |||||||| | ||| || ||||||| | ||||||||| || || | | Sbjct 29939 TACGCAGGCCGTGCTGCGCAATCTTGGCCTTGAGCGAGGCCCAGTCCCAGAGGTCCGTGG 29998 Query 22644 GCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGT 22703 | || | || |||||| ||||| |||| | ||| | ||||| |||||||| |||| Sbjct 29999 GAGT---ACGGTTCCACATGTCGTACTGCAGAATGCCCTGGCTCGCAGGGCTGCCCTCGT 30055 Query 22704 ACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGC-CTCCAACGCGCCGTAA 22762 | || ||||| | || || | ||||||| ||||| | || ||| | ||| ||| Sbjct 30056 ATGTCTCGTAGGTGCCGTACTGCTCGGCAAGCTCGCA-CGAGCGCTCGAGCGCAGCGTGG 30114 Query 22763 TATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG-GCGGCGACGCTTTCGTACGGCAT 22821 || || ||||| ||||| | | ||||| | |||| || || ||| || | || Sbjct 30115 TAAATCGTCTCAAAGATCTGCACGTTCAGCT-GGCGCGCCTCGGGGCTGTCAAAGGGGTA 30173 Query 22822 ACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTT 22881 | ||| |||| |||||| || || | |||||| || || ||||||||||| |||| Sbjct 30174 GCCCATGATCATGAACGCATCAGCGAGACCCTGGACACCGATACCGATCGGGCGGTGGCG 30233 Query 22882 CAGATTCGACACTTTTGCC---TCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTT 22938 || || || ||| ||| | || || | || |||||| | | ||| Sbjct 30234 CATGTTGGAGCGGCGCGCCGACTCG---ACGGGGTAGTAGTTGATATCGATGATGCGGTT 30290 Query 22939 CAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCC-G 22997 || ||| | || || | || | | | |||| ||| || | | Sbjct 30291 CAGGTTGCGCGTGACGACCTTGGCGACGTCGTGGAGACGCTGGAAGTTGTA--CGTCTTG 30348 Query 22998 ATTGTA-------CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACC 23050 | ||| | ||||| || | || ||||| || || ||||| ||||| | Sbjct 30349 GTCGTAGTGCCCTCGACAAAGGTGGGCAGCGCAATCGACGCGAGGTTGCACACGGCGGTC 30408 Query 23051 TCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATT---GCTACACTTTATCGTG 23107 ||||| || ||||||| | ||| || || || || || ||| | || ||| Sbjct 30409 TCGTCGGGCGAGCTGTACTCGATAATCTCTGTGCACAGGTTCGAGCTGCGG---ATGGTG 30465 Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATT-GCACGAATCCTTGTAGAGCATGTACGGCGT 23166 || | || | |||||||| || | || ||| | ||||||||| || || | || | Sbjct 30466 CCGAGGTTCTTTTGGTTGCTCTTGCTGTTCGCA-GCATCCTTGTACAGAATAAAGGGGTT 30524 Query 23167 GCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCG 23226 ||||||||||| ||| | ||||| |||||| ||||| | || || | ||| || Sbjct 30525 GCCCGTCTCGATCTGGGCCTCGAGGATCGCGTACCACAGCTTTTGCGCCTTGACAGTGCG 30584 Query 23227 CACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACA 23286 | | | || || ||||||| | ||| | | | || || || ||||| || Sbjct 30585 CTTGGCGCGTCCCTCGCGCTCGTACCGCTCGTAGAGCTCCTCGAACTCCTTGCCGTAGCA 30644 Query 23287 GTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAAC 23346 ||| | || ||||| | | || |||||||| ||| | || || || || Sbjct 30645 GTCAGAGAGACCGGGGGCCTCGGCGGGGCACATGAGCGACCAGTCTTCGTTCTTCTCGAC 30704 Query 23347 GCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTC 23406 || |||| || ||||| || ||||| || || |||||||| || ||||| || ||||| Sbjct 30705 ACGCTTCATGAACAGATCAGGGATCCAGAGCGCATAGAACAGGTCACGGGCACGGACCTC 30764 Query 23407 CTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTC 23466 ||| |||||| |||||| || ||| | || || |||||||| || ||||| ||||| Sbjct 30765 CTCCTTGCCGTGGTTCTTGCGCAGATCGATGAACTCAAACACGTCAGCGTGCCAGGGCTC 30824 Query 23467 GAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGT 23526 |||||| || ||||| || || || | ||| ||||||||||| |||||||| ||||| || Sbjct 30825 GAGGTAGACAGCAAAGGCACCGGGGCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCAGT 30884 Query 23527 GTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCAC 23586 |||||||||||| | ||||| ||||| | |||||| | ||||| ||| || | Sbjct 30885 GTTGTTGTACACGCGGAGCATGGGCACAATGCCGTTGCTCACGCCGTTCGTGCCGGCAAT 30944 Query 23587 ACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGA 23646 ||| || | || || | | ||| | || || ||| ||||| || ||| || Sbjct 30945 GTACGAGCCAGTGGCACGGATGCAGTGGATGTTGAGACCAATGCCACCCGCCGTCTTGCT 31004 Query 23647 TATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGC 23706 ||||| ||||| || || |||||||||||||||||||| ||| || || | Sbjct 31005 GATCATGGCGCAGGTCTTGAGTGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATGCA 31064 Query 23707 GACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCT 23766 || | ||| ||||| ||||| |||| || || || | || ||| || || || Sbjct 31065 CACGAGGAAGCACGACGACATCTGCGGGTTCGGGGTGCCTGCGTTGAAGAGAGTGGGCGA 31124 Query 23767 GGCGTGCGTAAAGTATCCATTCGACAT-TAGATTGTACGTGTCGATGGCGGCATCAATGT 23825 || || |||||| | |||||| ||| |||||||| || || ||||| ||||||| Sbjct 31125 CGCATGAGTAAAGGCCTTCTCCGACATGTAG-TTGTACGTCTCAATCGCGGCCTCAATGT 31183 Query 23826 CCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG---ACCG 23882 || ||||| || |||| |||||| ||||| | ||||| || || | |||| ||| Sbjct 31184 CCGAGCCGTGGATGCCGACGGCGACACGCATGAGCATGTGCTGGGGGCGCTCGGCAACCT 31243 Query 23883 TGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCAT 23942 | ||||||||| | |||||| || || | | || || || || ||| ||| | Sbjct 31244 T---GCCGTTAATGCGCAGCAGATAAGAGCGCTCAAGAGTCTTGAAACCGAAAAAGTTGT 31300 Query 23943 AGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGTACGCATTGGCAGCGATGA 24002 ||| |||||| || |||| | ||||||| | |||| | | | ||| | | |||| Sbjct 31301 AGTGAAAGTCGCGCTCGTAGATGATGGCCG-AGTCAA--GCACCTCCTTGTTATCCATGA 31357 Query 24003 T---GTTGTAATGAAAATTCGATATCATCGGCGTTTTAACGCCGGTCTTTGGATCGATCG 24059 | ||||| | || ||||| || | | |||||| || | || Sbjct 31358 TCACCTTGTAGGTCTCGTCGGAGATCATGGGGCTGTGCTTGCCGGTACGCGGGTTGACGT 31417 Query 24060 CTTCATACATATCGATAATGACATCGAAAAAAGAATCTTTAGTCTCCTTGTGCAAATTAG 24119 || |||| ||| | ||||| | ||| | | || ||||||||||||| || Sbjct 31418 ACTCGTACAGGTCGGTGATGACGCCACTAAAGGTCTTCTTGGTCTCCTTGTGCAGGTTGC 31477 Query 24120 ACACGGCCAATCTAGCCGCAAGCAACGAATAGTCGGAATGATCGATGGTCATGGCCGCTG 24179 | ||| | | || ||||||| | |||||||| || || ||||| || || | Sbjct 31478 TGATGGCGATACGCGCAGCAAGCACGGCATAGTCGGGGTGTGCGGTGGTCTTGTATGCAG 31537 Query 24180 CCGTCTCGGCGATTAGATTGTCCAATTCAGCGGTGGTCACGCCCGAATAGATTCC-TTGA 24238 | ||||| || || ||||| | || |||||||||||||| ||||| || | || Sbjct 31538 CGGTCTCTGCAGCGAGGTTGTCGAGCTCGACGGTGGTCACGCCCTCGTAGATACCATCGA 31597 Query 24239 TCGACGCGC-ACAGCTACGGATGTGGGATTTACAAAATTCATGTCGAGTCCGTAACATAG 24297 | | || | | || |||||| ||||| ||||||||||| ||||| || || Sbjct 31598 TAACCTTGCGGGTGATCTCGA--TGGGATCAACAAAGTTCATGTCGAGGCCGTAGCACAG 31655 Query 24298 TTT 24300 || Sbjct 31656 CTT 31658 Score = 244 bits (270), Expect = 9e-60 Identities = 578/864 (67%), Gaps = 23/864 (3%) Strand=Plus/Plus Query 57540 TTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCA 57599 ||||| |||| ||||| || | || || ||| | | ||||| ||||| || || Sbjct 41584 TTTGTGCTGTTCCCGATCCGGTACCACGAGATCTGGCAGTTCTACAAGAAGGCCGAGGCG 41643 Query 57600 TCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCC-- 57657 ||||| ||||||| ||| || | |||||| ||||| ||| ||| ||||| || Sbjct 41644 TCGTTCTGGACCGCCGAGGAGATCGACCTGAGCAAGGACCTGCACGACTGGGACAACCGG 41703 Query 57658 -TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGAT 57716 | || || |||| | | ||||| | || ||| ||||||| || ||||| || || Sbjct 41704 CTGAACGACAATGAGCGCCACTTTATCAGCCATGTGCTGGCGTTCTTTGCCGCGTCGGAC 41763 Query 57717 GGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCG 57776 || ||||| |||||||| || | || | || || || ||||| | | |||||| Sbjct 41764 GGCATTGTGAACGAGAACCTGCTGGAGCGCTTCTCGACCGAGGTGCAGGCCGCCGAGGCG 41823 Query 57777 AGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTA 57836 | ||||| ||||| || || | || || || | || || || | ||| ||||| Sbjct 41824 CGCTGCTTCTACGGCTTCCAGATCATGATGGAGAATATCCACTCGGAGACGTACTCGCTG 41883 Query 57837 CTCATCGATACGTACGTGAAGGACAACGA----CGAGAAACGTAGACTGTTCAACGCGAT 57892 || ||||| ||||| | || ||| || || ||| ||||| ||||||| Sbjct 41884 CTGATCGACACGTATATCCGCGAGCCCGAGCAGCGCGA---GTAC-CTGTTTGACGCGAT 41939 Query 57893 CGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAA-AGCG 57951 ||| || || || | | | |||||||| |||||| | | ||||| || | || Sbjct 41940 CGAGACGATCCCGGTGGTGAAGAAGAAGGCGGAGTGGGCGCTGCGGTGGATCAACGACCG 41999 Query 57952 CCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTT 58011 || || | | ||| | ||| | || | |||||||| ||||| || || || ||||||| Sbjct 42000 CCGCG-CGAGCTTCTCGGAGCGCCTGGTGGCGTTCGCGGCCGTGGAGGGCATCTTCTTTT 42058 Query 58012 CGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGT 58071 | || |||||| | || |||||| ||||||| || ||||||||||| || ||| ||| Sbjct 42059 CCGGATCGTTTGCGTCGATCTTTTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTGTCGT 42118 Query 58072 TTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGT 58131 | |||||| |||| ||||| |||||||| || || ||||| ||||| ||||| ||| Sbjct 42119 TCTCGAACGAGCTGATCTCGCGGGACGAGGGACTGCACACTGACTTTGCATGCCTGCTGT 42178 Query 58132 ACTCTCACATTGTCAATAAACCGACGCGGGATCGC---ATCTTGGACATTATCACCGAGG 58188 | ||| | || || | | ||| || ||| || || |||||||||| Sbjct 42179 TCAGCCAC---CTGAAGAAGCGGGCGCACCCCAGCACGATCGAGGCGATCATCACCGAGG 42235 Query 58189 CGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGA 58248 | || | ||| || | || ||| | | || || || |||||| | || |||| |||| Sbjct 42236 CCGTGGAGATTGAGCAGGACTTTTTGTCGGACGCGCTGCCGGTGTCGCTGATCGGCATGA 42295 Query 58249 ACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGA 58308 || |||||| |||||||||||||||| || ||| | || || | | || Sbjct 42296 ACGCGCGGCTGATGTGCCAGTACATTGAGTTTGTCGCAGACCGGCTGCTGGTGGCGCT-- 42353 Query 58309 TTGGAGAGCG--TCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCT 58366 ||| || || ||| || | || || || || || |||||| | || ||||| Sbjct 42354 CGGGAACCCGAAGCACTACCACGCAAAGAACCCATTCGACTTTATGGAGAACATTTCGCT 42413 Query 58367 CGAGGGCAAGACAAACTTTTTCGA 58390 |||||||| | ||||||||||| Sbjct 42414 GCAGGGCAAGTCGAACTTTTTCGA 42437 >seq39 Length=522589 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || ||||||||||| || || || || ||||| |||| || || | || Sbjct 29574 ATGCAAATCTTTGTAAAGACTCTTACTGGAAAGACTATCACGCTCGAAGTCGAGTCCTCG 29633 Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGAC 31309 |||| |||| | |||| |||| || | | ||||||||| ||| | || || ||| Sbjct 29634 GACACAATCGACAACGTCA---AGAGCAAGATCCAGGACAAGGAGGGCATTCCTCCGGAC 29690 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || ||||| || || || || ||||| ||| | || ||| || | ||||| || Sbjct 29691 CAACAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACGCTCAGCGACTAC 29750 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || |||||||| || || || Sbjct 29751 AACATCCAGAAGGAGAGCACTCTTCACCTTGTTCT 29785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765976521920