Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq30 143 2e-29 >seq30 Length=147637 Score = 143 bits (158), Expect = 2e-29 Identities = 273/399 (68%), Gaps = 6/399 (2%) Strand=Plus/Minus Query 21110 CACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGG 21169 ||| || ||||| |||| || || || || || |||||||| | | | ||| || || Sbjct 100226 CACATAGAACTGGCACATCACATGGCAGGGCGGCAGAGCCATAAGATCCATGTCTGCTGG 100167 Query 21170 GTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATCCACCAC 21229 ||||||||| |||| | |||||| || || | || | || || || | ||| Sbjct 100166 GTTCCACGCCGACATGAGGATGCGGCGGTCATTTGGATTGTTCTTGATCGTCTCGATCAC 100107 Query 21230 GTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGC 21289 | |||||||| || ||||| || | |||| | || || || ||||| || Sbjct 100106 CTGGGCGAGCTGGTCGACTCCCTGTCCGGCATAGTCTACATCAGCGTCCTGGTACTTGGC 100047 Query 21290 CCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCC 21349 ||||| || | ||||||||| || |||||||| || ||||| ||||||||||||| ||| Sbjct 100046 GCCAAAGTGCCGCCACTGGAAGCCATACACCGGACCGAGATCTCCCTCGCGGCGGTGCCC 99987 Query 21350 GAAGCCCTGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGCCGCG 21409 || || || | ||| ||| | || |||| ||||||| || | || ||||| Sbjct 99986 GAGACCGCGCTTCTCCAGAAACTCCTTTGAGCCGTTGCCGTCCCAGATGTGCACACCGCG 99927 Query 21410 --GCGCGA-CAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTCCAC 21466 || | |||| | ||||| ||||| ||| |||| |||||||| | |||||| | Sbjct 99926 CTCAGCAAGCAGT---CTAGAGTCAGTGGACCCCTTGATGAACCACAGAAGCTCCTCGGC 99870 Query 21467 GACGCCCCTCCAAAACACCCTTTTGGTGGTTAACAGAGG 21505 ||| || | | ||||||| |||||||| || || || Sbjct 99869 GACTCCACGGAAGAACACCCGCTTGGTGGTAAAAAGGGG 99831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775603772480