Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq40 134 1e-26 seq2 84.2 2e-11 >seq40 Length=46956 Score = 134 bits (148), Expect = 1e-26 Identities = 164/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 |||||||| || ||||| | || ||||| ||||||| | || || || || | ||| Sbjct 42232 GAGGCCGTGGAGATTGAGCAGGACTTTTTGTCGGACGCGCTGCCGGTGTCGCTGATCGGC 42291 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 ||||||||| |||||||| ||||||| |||||||| || ||| | ||| || || | Sbjct 42292 ATGAACGCGCGGCTGATGTGCCAGTACATTGAGTTTGTCGCAGACCGGCTGCTGGTGGCG 42351 Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016 ||||| | ||||| |||| | || ||||| || |||||| | ||||| ||| Sbjct 42352 CTCGGGAACCCGAAGCACTACCACGCAAAGAACCCATTCGACTTTATGGAGAACATTTCG 42411 Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTA 53060 || ||||||| | |||||||||||| | || |||||||| || Sbjct 42412 CTGCAGGGCAAGTCGAACTTTTTCGAGCGTCGGGTGGGCGACTA 42455 >seq2 Length=94478 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 139573 CTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATA 139632 ||| || || ||||| || ||||| | |||| || |||||||| || || ||| | Sbjct 13113 CTCCTTCTGGATGTTGTAGTCGCTAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAA 13172 Query 139633 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTG 139692 |||||| || || || || || || || || || ||||| ||| ||| || | | Sbjct 13173 GATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTTCCCTTGACGTT 13232 Query 139693 TTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTAC 139752 || | ||||||| | ||||||||||| ||| | ||||| || || | || || || Sbjct 13233 CTCGATAGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGAC 13292 Query 139753 GAATATTTGCATAGCT 139768 ||| | |||||| ||| Sbjct 13293 GAAGACTTGCATGGCT 13308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063528739200