Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq40 141 1e-28 >seq40 Length=46956 Score = 141 bits (156), Expect = 1e-28 Identities = 311/460 (68%), Gaps = 7/460 (2%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || ||||| || || |||||| |||||||| | || || ||||| || Sbjct 42179 AACAGCAGGCATGCAAAGTCAGTGTGCAGTCCCTCGTCCCGCGAGATCAGCTCGTTCGAG 42120 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 |||| || || ||||| ||||||||||| || |||||||| || |||||||| || || Sbjct 42119 AACGACAGACCAGGCATCAGGCCACGCTTCTTCAGCCAAAAGATCGACGCAAACGATCCG 42060 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAA-CTGGC--- 50126 ||||||||||| || || || || || || || || || | ||| | | || || || Sbjct 42059 GAAAAGAAGATGCCCTCCACGGCCGCGAACGCCACCAGGCGCTC-CGAGAAGCTCGCGCG 42001 Query 50127 GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 50186 || ||| | |||||| | ||||| || |||||||| || || || ||||| || Sbjct 42000 GCGGTCGTTGATCCACCGCAGCGCCCACTCCGCCTTCTTCTTCACCACCGGGATCGTCTC 41941 Query 50187 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 50246 || || | ||| || || | | | || | ||| || ||||||| || Sbjct 41940 GATCGCGTCAAACAGGTACTCGCGCTGCTCGGGCTCGCGGATATACGTGTCGATCAGCAG 41881 Query 50247 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 50306 ||| | ||||| || || || || || ||||| || |||||||| || | || Sbjct 41880 CGAGTACGTCTCCGAGTGGATATTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGCGC 41821 Query 50307 CTCGGTAATCTGCACTTCTGTACAAAATCG-TTCAGCTAAATTTTCATTCACTATTCCGT 50365 ||||| |||||| || || | || || | |||| | || || ||||| || |||| Sbjct 41820 CTCGGCGGCCTGCACCTCGGTCGAGAAGCGCTCCAGC-AGGTTCTCGTTCACAATGCCGT 41762 Query 50366 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATG 50405 | || ||||| ||||||| ||||| | ||||| || Sbjct 41761 CCGACGCGGCAAAGAACGCCAGCACATGGCTGATAAAGTG 41722 Score = 120 bits (132), Expect = 4e-22 Identities = 435/673 (65%), Gaps = 6/673 (1%) Strand=Plus/Plus Query 79900 TCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCA 79959 ||| | || ||||| | |||||| ||| | | | || || || ||||| || |||||| Sbjct 30664 TCGGCGGGGCACATGAGCGACCAGTCTTCGTTCTTCTCGACACGCTTCATGAACAGATCA 30723 Query 79960 GGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTT 80018 || ||||| || || ||| || || || | || | |||||| || || ||||| Sbjct 30724 GGGATCCAGAGCGC-ATAGAACAGGTCACGGGCACGGACCTCCTCCTTGCCGTGGTTCTT 30782 Query 80019 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAAC 80078 ||||||| |||| | | | |||| ||||| || || | ||| | || | | Sbjct 30783 GCGCAGATCGATGAACTCAAACACGTCAGCGTGCCAGGGCTCGAGGTAGACAGCAAAGGC 30842 Query 80079 TCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAA 80138 || || || ||||| || ||||| || | ||| | || ||||| || || || | | Sbjct 30843 ACCGGGGCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCAGTGTTGTTGTACACGCGGAG 30902 Query 80139 CATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACG 80198 ||| || | ||| || ||| || || || |||| || || ||| ||||||| Sbjct 30903 CATGGGCACAATGCCGTTGCTCACGCCGTTCGTGCCGGCAATGTACGAGCCAGTGGCACG 30962 Query 80199 AATATTACTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 80257 || | | || | ||||| || || || ||| | || ||| | ||||| | Sbjct 30963 GATGC-AGTGGATGTTGAGACCAATGCCACCCGCCGTCTTGCTGATCATGGCGCAGGTCT 31021 Query 80258 TTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAG 80317 | | || || ||||||||||| || || || ||||| | || || || | Sbjct 31022 TGAGTGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATGCACACGAGGAAGCACGACG 31081 Query 80318 ACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATT 80377 |||| || | || || || || || | || || || || || ||||| | Sbjct 31082 ACATCTGCGGGTTCGGGGTGCCTGCGTTGAAGAGAGTGGGCGACGCATGAGTAAAGGCCT 31141 Query 80378 TTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCT 80436 | || |||| |||| |||||||||||||| || | || || ||| | || || || Sbjct 31142 TCTCCGACATGTAG-TTGTACGTCTCAATCGCGGCCTCAATGTCCGAGCCGTGGATGCCG 31200 Query 80437 ACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAAC 80496 || ||||||||||| | ||||||||| || | || | | |||| || || || | Sbjct 31201 ACGGCGACACGCATGAGCATGTGCTGGGGGCGCTCGGCAACCTTGCCGTTAATGCGCAGC 31260 Query 80497 AAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAA 80556 | ||||| || | ||| || ||||| ||| ||||||| |||||| || ||||| Sbjct 31261 AGATAAGAGCGCTCAAGAGTCTTGAAACCGAAAAAGTTGTAGTGAAAGTCGCGCTCGTAG 31320 Query 80557 ATAATAACCGAGT 80569 || || |||||| Sbjct 31321 ATGATGGCCGAGT 31333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268117644640