Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq40 127 3e-24 >seq40 Length=46956 Score = 127 bits (140), Expect = 3e-24 Identities = 305/457 (67%), Gaps = 7/457 (2%) Strand=Plus/Minus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| || ||||| || || |||||| ||||| || | || | ||||| || Sbjct 42179 AACAGCAGGCATGCAAAGTCAGTGTGCAGTCCCTCGTCCCGCGAGATCAGCTCGTTCGAG 42120 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 |||| || || ||||| ||||||||||| || |||||||| || |||||||| ||||| Sbjct 42119 AACGACAGACCAGGCATCAGGCCACGCTTCTTCAGCCAAAAGATCGACGCAAACGATCCG 42060 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA----CCGGC 42231 ||||||||||| || || || ||||| || || | || | ||| | | || || Sbjct 42059 GAAAAGAAGATGCCCTCCACGGCCGCGAACGCCACCAGGCGCTC-CGAGAAGCTCGCGCG 42001 Query 42232 ACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 42291 | ||| | |||||| | ||||| || |||||||| || || || ||||| || Sbjct 42000 GCGGTCGTTGATCCACCGCAGCGCCCACTCCGCCTTCTTCTTCACCACCGGGATCGTCTC 41941 Query 42292 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAG 42351 || || | ||| || || | | | || | ||| || ||||||| || Sbjct 41940 GATCGCGTCAAACAGGTACTCGCGCTGCTCGGGCTCGCGGATATACGTGTCGATCAGCAG 41881 Query 42352 ACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGC 42411 ||| | || || || || || || || ||||| || |||||||| || | || Sbjct 41880 CGAGTACGTCTCCGAGTGGATATTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGCGC 41821 Query 42412 CTCGGTAACCTGTACTTCTGTACAAAATCG-TTCAGCTAAATTTTCGTTCACTATTCCGT 42470 ||||| |||| || || || | || || | |||| | || |||||||| || |||| Sbjct 41820 CTCGGCGGCCTGCACCTCGGTCGAGAAGCGCTCCAGC-AGGTTCTCGTTCACAATGCCGT 41762 Query 42471 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA 42507 | || ||||| ||||||| ||||| | ||||| Sbjct 41761 CCGACGCGGCAAAGAACGCCAGCACATGGCTGATAAA 41725 Score = 109 bits (120), Expect = 7e-19 Identities = 428/666 (64%), Gaps = 8/666 (1%) Strand=Plus/Plus Query 71989 GGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATC 72048 || ||||| | ||||| ||| | | | | || || ||||| || |||||||| ||| Sbjct 30670 GGGCACATGAGCGACCAGTCTTCGTTCTTCTCGACACGCTTCATGAACAGATCAGGGATC 30729 Query 72049 CAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAG 72107 || || || ||| || || || | || | |||||| || || ||||| || Sbjct 30730 CAGAGCGC-ATAGAACAGGTCACGGGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAG 30788 Query 72108 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGG 72167 ||||| |||| | | | |||| ||||| || || | ||| | || | | || || Sbjct 30789 ATCGATGAACTCAAACACGTCAGCGTGCCAGGGCTCGAGGTAGACAGCAAAGGCACCGGG 30848 Query 72168 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 72227 || ||||| || ||||| || | ||| | || ||||| || || || | | ||| || Sbjct 30849 GCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCAGTGTTGTTGTACACGCGGAGCATGGG 30908 Query 72228 AATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--A 72285 | ||| || ||| | || || || |||| || || ||| ||||||| || | Sbjct 30909 CACAATGCCGTTGCTCACGCCGTTCGTGCCGGCAATGTACGAGCCAGTGGCACGGATGCA 30968 Query 72286 TTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 72345 || |||| |||| || || || ||| | || ||| | ||||| || | Sbjct 30969 GTGGATGTTGA--GACCAATGCCACCCGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGT 31026 Query 72346 GTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATT 72405 || || ||||||||||| || || ||| ||||| | || || || ||||| Sbjct 31027 GTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATGCACACGAGGAAGCACGACGACATC 31086 Query 72406 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 72465 || | || || || || || | || || || || || ||||| || || Sbjct 31087 TGCGGGTTCGGGGTGCCTGCGTTGAAGAGAGTGGGCGACGCATGAGTAAAGGCCTTCTCC 31146 Query 72466 GACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGC 72524 |||| |||| |||||||||||||| || | || || ||| | || || || || || Sbjct 31147 GACATGTAG-TTGTACGTCTCAATCGCGGCCTCAATGTCCGAGCCGTGGATGCCGACGGC 31205 Query 72525 GACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTA 72584 ||||||||| | ||| ||||| || | || | | |||| || || || || || Sbjct 31206 GACACGCATGAGCATGTGCTGGGGGCGCTCGGCAACCTTGCCGTTAATGCGCAGCAGATA 31265 Query 72585 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 72644 || || | ||| || ||||| ||| ||||||| |||||| || ||||| || || Sbjct 31266 AGAGCGCTCAAGAGTCTTGAAACCGAAAAAGTTGTAGTGAAAGTCGCGCTCGTAGATGAT 31325 Query 72645 AACCGA 72650 |||| Sbjct 31326 GGCCGA 31331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138562417760