Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq40 116 4e-21 >seq40 Length=46956 Score = 116 bits (128), Expect = 4e-21 Identities = 291/436 (67%), Gaps = 7/436 (2%) Strand=Plus/Plus Query 50422 GTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATATTTTAC 50481 |||||||| || || || || | || |||||||| ||||| | || |||| Sbjct 42025 GTGGCGTTCGCGGCCGTGGAGGGCATCTTCTTTTCCGGATCGTTTGCGTCGATCTTTTGG 42084 Query 50482 ATTAA-AACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGA 50540 | || || | | ||| | ||||| || || |||| |||||| |||| ||||| || Sbjct 42085 CTGAAGAAGCGT-GGCCTGATGCCTGGTCTGTCGTTCTCGAACGAGCTGATCTCGCGGGA 42143 Query 50541 CGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATT 50600 ||| ||| ||||||| |||||||| || || | || | | | || ||| Sbjct 42144 CGAGGGACTGCACACTGACTTTGCATGCCTGCTGTTCAGC---CACCTGAA-GAAGCGGG 42199 Query 50601 ATCATACGAA-ACAATTTTGGACATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTT 50659 || | | || || || || ||| || ||||| || || || | || |||| Sbjct 42200 CGCACCCCAGCACGATCGAGGCGATCATCACCGAGGCCGTGGAGATTGAGCAGGACTTTT 42259 Query 50660 TCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACA 50719 | ||||||| | || ||| | || | ||||||||||| |||||||| |||||| Sbjct 42260 TGTCGGACGCGCTGCCGGTGTCGCTGATCGGCATGAACGCGCGGCTGATGTGCCAGTACA 42319 Query 50720 TTGAGTTTGTTGCAGACAGATTGTTGTTGCAGCTGGGACAACCGAAATACTATAATGCAC 50779 |||||||||| |||||| | || || || ||| || | ||||| |||| | ||| Sbjct 42320 TTGAGTTTGTCGCAGACCGGCTGCTGGTGGCGCTCGGGAACCCGAAGCACTACCACGCAA 42379 Query 50780 GTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAA 50839 ||||| || |||||| | ||||| ||| || ||||||| | ||||||||||| Sbjct 42380 AGAACCCATTCGACTTTATGGAGAACATTTCGCTGCAGGGCAAGTCGAACTTTTTCGAGC 42439 Query 50840 GACGTGTAGGCGAATA 50855 | || || ||||| || Sbjct 42440 GTCGGGTGGGCGACTA 42455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507013918336320