Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq39 105 6e-18 seq58 89.7 5e-13 >seq39 Length=522589 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 94817 TCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAG 94876 ||||| || | ||| || ||||| | ||| | ||||| ||||| || ||| ||||| Sbjct 29764 TCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAG 29705 Query 94877 ATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCG 94936 || | | || || || |||||||| || || ||||| | || || ||||||| | Sbjct 29704 ATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTG 29645 Query 94937 CCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACA 94996 ||| ||||| | | ||||| || | |||||| || |||||||||||||| || ||| Sbjct 29644 TCGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGTCTTTCCAGTAAGAGTCTTTACA 29585 Query 94997 AAGATCTGCAT 95007 ||||| ||||| Sbjct 29584 AAGATTTGCAT 29574 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 94817 TCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAG 94876 ||||| || | ||| || || |||| ||| | ||||||||||| || ||| ||||| Sbjct 30448 TCCTTCTGGATGTTGTAGTCACTCAGAGTACGGCCGTCCTCCAGCTGCTTGCCGGCAAAG 30389 Query 94877 ATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCG 94936 || | | || || || || || ||||| || ||||| | || || ||||||| Sbjct 30388 ATAAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTT 30329 Query 94937 CCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACA 94996 ||| ||||| | | || || || | |||||| || || |||||||| || || ||| Sbjct 30328 TCGATCGTGTCCGAGGACTCAACTTCGAGCGTGATAGTCTTGCCAGTAAGGGTCTTGACA 30269 Query 94997 AAGATCTGCAT 95007 |||| |||||| Sbjct 30268 AAGACCTGCAT 30258 >seq58 Length=446738 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 94817 TCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAG 94876 ||||| || | ||| || ||||| | |||| ||||| ||||| || ||| | || Sbjct 376230 TCCTTCTGGATGTTGTAGTCGCTAAGAGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAA 376171 Query 94877 ATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCG 94936 || || | || || || ||||||||||| || ||||| | ||| || | ||||||| | Sbjct 376170 ATCAACCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTAGACTTGACGATG 376111 Query 94937 CCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACA 94996 ||| ||||| ||||| |||| ||||| || || || || || || || || Sbjct 376110 TCGATCGTGTCGTTCGACTCGACCTCAAGAGTGATCGTCTTGCCCGTGAGTGTCTTGACG 376051 Query 94997 AAGATCTGCATG 95008 |||||||||||| Sbjct 376050 AAGATCTGCATG 376039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290774123360