Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq75 176 7e-40 seq20 125 1e-24 >seq75 Length=115788 Score = 176 bits (194), Expect = 7e-40 Identities = 197/261 (75%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||| || |||| |||| ||||| || |||||||| || ||||| ||||| ||||| Sbjct 26310 GCTAAGCGCCACCGCAAGATC-CTTCGTGACAACATCCAGGGTATCACTAAGCCTGCTAT 26252 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| || |||||||| || ||||||||| |||| || || |||| || |||| Sbjct 26251 CCGCCGTCTCGCACGTCGTGGCGGTGTCAAGCGTATCTCGGGTCTGATCTACGACGAGAC 26192 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| ||| | ||| |||||||| ||| |||||||| || | || ||| || || Sbjct 26191 TCGTGGTGTCCTCAAGCTCTTCCTCGAGAGCGTTATCCGCGACTCGGTCACCTACACGGA 26132 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||||||||| || | || || |||| || | || || || || Sbjct 26131 GCACGCCAAGCGCAAGACTGTCACTTCGCTCGACGTCATCTACGCGCTCAAGCGCCAGGG 26072 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 ||| | | || ||||| || Sbjct 26071 CCGCACCCTCTACGGTTTCGG 26051 >seq20 Length=1667054 Score = 125 bits (138), Expect = 1e-24 Identities = 177/246 (72%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || |||| ||||| | || || |||||||| || ||||| ||||| || | Sbjct 720024 CGCAAAGCGCCACCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACGAAGCCTGCCA 720082 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||| || |||||||| || || |||||| | || || | |||| || |||| Sbjct 720083 TCCGTCGTCTCGCCCGTCGTGGCGGTGTGAAGCGTATTTCGGGCCTTATCTACGACGAGA 720142 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || || | ||| ||||||| ||| ||| |||| || | || || || | Sbjct 720143 CGCGCAGCGTGCTCAAGCTCTTCCTTGAGAGCGTCATCCGCGACTCGGTCACATACACGG 720202 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || |||||||||||||| | || | |||| || | || || || | Sbjct 720203 AGCACGCGAAGCGCAAGACTGTCACCTCGCTCGACGTTATCTACGCCCTCAAGCGCCAGG 720262 Query 16671 GCCGTA 16676 |||||| Sbjct 720263 GCCGTA 720268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075130512668