Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq39 104 2e-17 seq75 84.2 2e-11 >seq39 Length=522589 Score = 104 bits (114), Expect = 2e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 || ||||||| | |||||||| || | |||||||| | || || ||||||||||| | Sbjct 29570 CACAATGCAAATCTTTGTAAAGACTCTTACTGGAAAGACTATCACGCTCGAAGTCGAGTC 29629 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | ||||| ||||| | ||||| ||||| ||||| || ||||| ||||| || Sbjct 29630 CTCGGACACAATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCTCCGGA 29689 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 |||||| | ||||| | | ||||||||| || || || | | | | ||||||| || Sbjct 29690 CCAACAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACGCTCAGCGACTA 29749 Query 24167 TAACATTCAAAAAGA 24181 ||||| || || || Sbjct 29750 CAACATCCAGAAGGA 29764 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| ||||| || || || | ||||| || | || || ||||||||||| || Sbjct 30030 ATGCAGGTGTTCGTCAAGACCCTTACTGGCAAGACTATCACGCTCGAAGTCGAGTCCTCG 30089 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | ||||| ||||| ||||| || ||||| ||||| || ||| Sbjct 30090 GACACAATCGAAAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 30149 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | | ||||||||| || || || | | | | ||||||| || ||| Sbjct 30150 CAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACGCTCAGCGACTACAAC 30209 Query 24171 ATTCAAAAAGA 24181 || || || || Sbjct 30210 ATCCAGAAGGA 30220 >seq75 Length=115788 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| || ||||| || || | || || || | || || |||| |||||| || | Sbjct 54774 ATGCAGGTCTTTGTCAAGACTCTTACCGGCAAGACAATCACTCTCGAGGTCGAGTCCTCC 54715 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || ||||| ||||| ||||| || ||||| || || |||||| Sbjct 54714 GATACCATTGACATCGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAA 54655 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | | ||||||||||| || |||| | | | | |||| || ||||| Sbjct 54654 CAGCGTCTGATCTTTGCAGGCAAGCAACTAGAGGATGGCCGCACCCTCAGTGACTATAAT 54595 Query 24171 ATTCAAAAAGA 24181 || || || || Sbjct 54594 ATCCAGAAGGA 54584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935601771780