Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq40 199 4e-46 seq75 120 3e-22 seq2 120 3e-22 seq39 107 2e-18 seq58 104 2e-17 >seq40 Length=46956 Score = 199 bits (220), Expect = 4e-46 Identities = 348/501 (69%), Gaps = 9/501 (2%) Strand=Plus/Plus Query 46099 AAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGT 46158 ||||| | || |||||| || |||||||||| | || ||||| ||| | ||||| Sbjct 41962 AAGAAGGCGGAGTGGGCGCTGCGGTGGATCAACGACCGCCGCGCGAGCTTCTCGGAGCGC 42021 Query 46159 ATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTT 46218 ||||||| || ||| ||||||||| |||| ||||| || ||||| | |||||| Sbjct 42022 CTGGTGGCGTTCGCGGCCGTGGAGGGCATCTTCTTTTCCGGATCGTTTGCGTCGATCTTT 42081 Query 46219 TACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGC 46278 | | || | ||| | ||||| || ||| |||| ||||||||||| ||||| Sbjct 42082 TGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTGTCGTTCTCGAACGAGCTGATCTCGCGG 42141 Query 46279 GACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAAG 46338 |||||||| ||||| || |||||||| || || || | || | | || | ||| Sbjct 42142 GACGAGGGACTGCACACTGACTTTGCATGCCTG--CTGTT-CAGCCACCTGAAG---AAG 42195 Query 46339 CTTGCGCCCGACACCGTGCT-GAGC--ATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAG 46395 | |||| | || | | | ||| || ||| ||||| |||| |||||| |||| Sbjct 42196 CGGGCGCACCCCAGCACGATCGAGGCGATCATCACCGAGGCCGTGGAGATTGAGCAGGAC 42255 Query 46396 TTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGAC 46455 ||||| ||| ||| ||||| | | ||| | ||||||||||| | | |||||| | Sbjct 42256 TTTTTGTCGGACGCGCTGCCGGTGTCGCTGATCGGCATGAACGCGCGGCTGATGTGCCAG 42315 Query 46456 TACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCAC 46515 ||||| |||||||| || ||||| ||||| ||| ||| | |||||||| | ||| Sbjct 42316 TACATTGAGTTTGTCGCAGACCGGCTGCTGGTGGCGCTCGGGAACCCGAAGCACTACCAC 42375 Query 46516 GCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTC 46575 || || ||||| || |||||| | ||||| || ||| ||||||| | || |||||| Sbjct 42376 GCAAAGAACCCATTCGACTTTATGGAGAACATTTCGCTGCAGGGCAAGTCGAACTTTTTC 42435 Query 46576 GAAAAGCGCGTCGGCGAGTAT 46596 || || || ||||| ||| Sbjct 42436 GAGCGTCGGGTGGGCGACTAT 42456 Score = 181 bits (200), Expect = 1e-40 Identities = 964/1510 (64%), Gaps = 40/1510 (3%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 || || ||||| ||||||||||| | |||||| |||| || | ||| ||| | || Sbjct 29809 TTCACCACCTGGAACTCGCCGGCGAGCACACGGCGCATGTAAATGTTGCTGGTGTATGGC 29868 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| |||||||| ||| || || || |||| ||||||||||| || | | Sbjct 29869 TCAAAGCACTCGTTAAAGCCGAGAATCTGGCTCGTCGACGCGGTGGGCATCGGGGCGAGC 29928 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || || ||||||||||||| | || | |||| |||| |||| ||||| Sbjct 29929 AGCAGCGAGTTACGCAGGCCGTGCTGCGCAATCTTGGCCTTGAGCGAGGCCCAGTCCCAG 29988 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || || || | || ||||||||||||||||| |||||||| ||| || |||||| Sbjct 29989 AGGTCCGTGGGAGTACGGTTCCACATGTCGTACTGCAGAATGCCCTGGCTCGCAGGGCTG 30048 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGC-CTCCAGAGC 145356 || | | | ||| |||| | | ||| ||||||| || || ||| || || Sbjct 30049 CCCTCGTATGTCTCGTAGGTGCCGTACTGCTCGGCAAGCTCGC-ACGAGCGCTCGAGCGC 30107 Query 145357 GCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTA 145416 || ||||| ||||| || ||| ||| ||| | ||| || ||| || | Sbjct 30108 AGCGTGGTAAATCGTCTCAAAGATCTGCACGTTCAGCTGGCGCGCCTCGGGGCTGTCAAA 30167 Query 145417 CGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCG 145476 || || || | | || ||||| ||||| ||||| | || | ||||| || || Sbjct 30168 GGGGTAGCCCATGATCATGAACGCATCAGCGAGACCCTGGACACCGATACCGATCGGGCG 30227 Query 145477 ATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATTTT 145536 || ||||||| | ||||||||||| || || || ||||| || Sbjct 30228 GTGGCGCATGTTGGAGCGGCGCGCCGACTCGACGGGGTAGTAGTTGATATCGATGATGCG 30287 Query 145537 ATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAAC--CGA 145594 |||| ||| ||| || ||||| | | || | | | |||| || | Sbjct 30288 GTTCAGGTTGCGCGTGACGACCTTGGCGACGTCGTGGAGACGCTGGAAGTTGTACGTCTT 30347 Query 145595 GCCTCGTCAACGACC---ACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCC 145651 | |||| | | || ||| || | | || |||||||| | || || || || Sbjct 30348 G-GTCGT-AGTGCCCTCGACAAAGGTGGGCAGCGCAATCGACGCGAGGTTGCACACGGCG 30405 Query 145652 GTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATT---GCTACATTTGATG 145708 ||||| |||| |||||| | | ||||| | ||||| || ||| | |||| Sbjct 30406 GTCTCGTCGGGCGAGCTGTACTCGATAATCTCTGTGCACAGGTTCGAGCTGC---GGATG 30462 Query 145709 GTTCCCAGATTTTGCTGATTACTTTTCCTGTT-GCACGCGTCCTTGTAGAGCATGTACGG 145767 || || || || | || || || || ||||| ||| || |||||||| || || | || Sbjct 30463 GTGCCGAGGTTCTTTTGGTTGCTCTTGCTGTTCGCA-GCATCCTTGTACAGAATAAAGGG 30521 Query 145768 TCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-TCCTGCGCACGCAC- 145824 ||| ||||| | ||| | ||| | ||| || || || | ||||| || Sbjct 30522 GTTGCCCGTCTCGATCTGGGCCTCGAGGAT--CGCGTACCACAGCTTTTGCGCCTTGACA 30579 Query 145825 CTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACC 145884 ||| ||| | ||| ||||| ||||| | |||||||||||| ||| | || Sbjct 30580 GTGC-GCTTGGCGCGTCCCTCGCGCTCGTACCGCTCGTAGAGCTCCTCGAACTCCTTGCC 30638 Query 145885 GTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGC 145944 |||||| || || || ||||| || | ||| ||||| |||||||| | |||| Sbjct 30639 GTAGCAGTCAGAGAGACCGGGGGCCTCGGCGGGGCACATGAGCGACCAGTCTTCGTTCTT 30698 Query 145945 GTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTT 146004 | ||| |||| ||| |||| ||| || | ||| ||||| || | || ||| || || Sbjct 30699 CTCGACACGCTTCATGAACAGATCAGGGATCCAGAGCGCATAGAACAGGTCACGGGCACG 30758 Query 146005 GCAATCCTCAGCACCCATGTT-TCGCTTCAAAT-TAAGCACACTATAGATGTCCGCGTGC 146062 | ||||| || ||| | || || || | | || | | | | ||| |||||| Sbjct 30759 GACCTCCTCCTTGCCGTGGTTCTTGC-GCAGATCGATGAACTC-AAACACGTCAGCGTGC 30816 Query 146063 CACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGA 146119 || || || | ||||| || | ||| || || ||||| |||||||| |||| Sbjct 30817 CAGGGCTCGAGGTAGACAGCAAAGGCACCGGGGCGCTTGTTGCCGCCCTGGTCGACGTAG 30876 Query 146120 CGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTA 146179 || | ||||||| | ||||| | ||||||| | | |||| || ||||||||||| Sbjct 30877 CGGGCAGTGTTGTTGTACACGCGGAGCATGGGCACAATGCCGTTGCTCACGCCGTTCGTG 30936 Query 146180 GAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGA-GACCGCCGCC 146238 | || | ||| || || | ||| || | || | || | | | ||||| Sbjct 30937 CCGGCAATGTACGAGCCAGTGGCACGGATGCAGTGGATGTTGAGACCAATGCCACCCGCC 30996 Query 146239 GTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATCG-- 146296 || |||| || ||||||| ||| || ||||||||||| || || ||| Sbjct 30997 GT-CTTGCTGATCATGGCGCAGGTCTTGAGTGTGTCGTAGATGCCCTCGATCGAGTCGTC 31055 Query 146297 CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAAC 146356 |||| |||| | || |||||||| ||||||||| |||| || || || ||| Sbjct 31056 CTTC--ATGCACACGAGGAAGCACGACGACATCTGCGGGTTCGGGGTGCCTGCGTTGAAG 31113 Query 146357 AACGTCGGGCTCGCGTGCGTAAA--CATTTTTCGGCTCATCATCCGATACGTTTCGATAG 146414 | || || ||| || ||||| | || | || ||| ||||| || || | Sbjct 31114 AGAGTGGGCGACGCATGAGTAAAGGCCTTCTCCG--ACATGTAGTTGTACGTCTCAATCG 31171 Query 146415 CGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCC 146474 || | | |||||| ||| || ||||| | ||||| |||||||||||||| ||||| | Sbjct 31172 CGGCCTCAATGTCCGAGCCGTGGATGCCGACGGCGACACGCATGAGCATGTGCTGGGGGC 31231 Query 146475 GCTCCGCCACTTGATTGTCAATCTTTAACAAATAGCCGTTCTCCAGGGTTTTGTATCCGA 146534 |||| || || | || ||| | || ||| | ||| || || ||| | |||| Sbjct 31232 GCTCGGCAACCTTGCCGTTAATGCGCAGCAGATAAGAGCGCTCAAGAGTCTTGAAACCGA 31291 Query 146535 AAAATTTGTA 146544 |||| ||||| Sbjct 31292 AAAAGTTGTA 31301 >seq75 Length=115788 Score = 120 bits (132), Expect = 3e-22 Identities = 168/233 (72%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 131004 TGAGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC 131063 || |||||| || | ||| ||||||| ||| | || |||||| || || || || || Sbjct 54544 TGCGCCACCACGGAGACGGAGCACTAGATGGAGCGTGCTCTCCTTCTGGATATTATAGTC 54603 Query 131064 GCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGG 131123 || | |||||| |||||||| ||||||||||| |||| | |||||| || ||||| Sbjct 54604 ACTGAGGGTGCGGCCATCCTCTAGTTGCTTGCCTGCAAAGATCAGACGCTGTTGATCCGG 54663 Query 131124 AGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGA-GCTGCTCCACAGTATCGGTGGACT 131182 || || || || ||||| ||| || ||||| | || || | ||||||| ||||| Sbjct 54664 GGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGATG-TCAATGGTATCGGAGGACT 54722 Query 131183 CGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 ||| |||| || | || || ||||| ||||| || || || | ||||||| Sbjct 54723 CGACCTCGAGAGTGATTGTCTTGCCGGTAAGAGTCTTGACAAAGACCTGCATG 54775 >seq2 Length=94478 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||||||| | || | || |||||| || |||||||| ||||| Sbjct 13078 CCACCACGCAGACGCAGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTA 13137 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| || |||| | ||||| |||||||| ||| Sbjct 13138 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGG 13197 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | ||| | ||| |||| ||||| | Sbjct 13198 ATACCCTCCTTGTCCTGGATCTTTCCCTTGACGTTCTCGATAGTGTCGGAAGACTCCACC 13257 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | ||| | || || || || || || || ||||| | |||||| || Sbjct 13258 TCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAGACTTGCATGGCT 13308 >seq39 Length=522589 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| || |||||||| ||||| | ||||| |||||| ||||||||||| || | Sbjct 29765 CTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAA 29706 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| | ||||| ||||||||||| || || || ||||| ||| || ||||| | Sbjct 29705 GATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTT 29646 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | || || | |||||||| |||| || | || || || || ||||| ||||| Sbjct 29645 GTCGATTGTGTCCGAGGACTCGACTTCGAGCGTGATAGTCTTTCCAGTAAGAGTCTTTAC 29586 Query 131223 GAAAATCTGCAT 131234 || || ||||| Sbjct 29585 AAAGATTTGCAT 29574 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | || | || |||||| || |||||||| ||||| Sbjct 30256 CCACCACGCAGACGAAGGACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTG 30197 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| || |||| | ||||| ||||||||||| Sbjct 30196 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGA 30137 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | |||||||| Sbjct 30136 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTTTCGATTGTGTCCGAGGACTCGACT 30077 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || || || || || ||||| | |||||| Sbjct 30076 TCGAGCGTGATAGTCTTGCCAGTAAGGGTCTTGACGAACACCTGCAT 30030 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || | || | || |||||| || |||||||| || ||| Sbjct 30484 CCACCGCGGAGACGAAGGACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCACTC 30425 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| ||||||||||| || |||| | |||||| |||||||| ||| Sbjct 30424 AGAGTACGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATAAGACGCTGTTGGTCCGGGGGG 30365 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | |||||| | Sbjct 30364 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTTTCGATCGTGTCCGAGGACTCAACT 30305 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || || || || || || || | |||||| Sbjct 30304 TCGAGCGTGATAGTCTTGCCAGTAAGGGTCTTGACAAAGACCTGCAT 30258 >seq58 Length=446738 Score = 104 bits (114), Expect = 2e-17 Identities = 141/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| || |||||||| ||||| | ||||| |||||| ||||||||||| ||| | Sbjct 376231 CTCCTTCTGGATGTTGTAGTCGCTAAGAGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 376172 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGA-GCT 131161 || || ||||| ||||||||||| || || || ||||| || || ||||| | | Sbjct 376171 AATCAACCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTAGACTTGACGAT 376112 Query 131162 GCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTA 131221 | || | || ||| | ||||||| || | || | || || || || || || || | Sbjct 376111 G-TCGATCGTGTCGTTCGACTCGACCTCAAGAGTGATCGTCTTGCCCGTGAGTGTCTTGA 376053 Query 131222 CGAAAATCTGCATG 131235 |||| ||||||||| Sbjct 376052 CGAAGATCTGCATG 376039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012351587840