Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq14 125 5e-24 seq10 123 2e-23 seq2 89.7 3e-13 >seq14 Length=453696 Score = 125 bits (138), Expect = 5e-24 Identities = 211/303 (70%), Gaps = 2/303 (1%) Strand=Plus/Minus Query 6189 GTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAG 6248 |||| ||| ||||||||||||| ||||| | | ||| |||| || ||| Sbjct 197331 GTGGACGACAAGTTCTACCGCTACCGGATGCCCCTGCTGGAGATCAAAATCGAAGGCAAG 197272 Query 6249 GGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGC 6308 || ||||| || || || ||||| ||||||| | || |||| ||||||| | ||| Sbjct 197271 GGCAACGGCATCAAGACAGTCATCCCCAACATGTCGGACATCGCCCGGGCGCTCAGTCGC 197212 Query 6309 CCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGT-TTGA 6367 ||| |||||||||| || || || || || || || || ||||| ||||| || | |||| Sbjct 197211 CCTCCCACCTACCCCACCAAGTACTTTGGCTGTGAGCTGGGCGCGCAGAC-CATTGTTGA 197153 Query 6368 TCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTT 6427 | | || ||| |||||||| || ||||| | || || | | |||| || | Sbjct 197152 TGAGAAGGGCGACCGCTTCATTGTGAACGGCGCTCACGACGCAAACCGCCTGCGTGAGCT 197093 Query 6428 ACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 ||||| ||||| ||| ||||||||| || ||| | | ||| | ||||| ||||| | Sbjct 197092 GCTTGATGGCTTCATTGACAAGTTTGTCCTCTGTGGTCACTGCAAGAACCCTGAGACTGC 197033 Query 6488 GCT 6490 ||| Sbjct 197032 GCT 197030 >seq10 Length=96806 Score = 123 bits (136), Expect = 2e-23 Identities = 83/93 (89%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| ||||||||||||||||||||||||||||||| || |||||| || Sbjct 1578 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCATTC 1637 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| |||||||||||||||||||||||||||| Sbjct 1638 ATCCATTCATGCGCGTCACTAATTAGATGACGA 1670 >seq2 Length=94478 Score = 89.7 bits (98), Expect = 3e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | || ||||| ||| | || |||||||||||||| || || ||||| || Sbjct 13077 ACCACCACGCAGACGCAGCACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 13136 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 | || | || || | || || |||||||| || ||||| ||||| || | ||| Sbjct 13137 AAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGG 13196 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || || || |||||| || ||| ||| || |||| || ||| || | || || Sbjct 13197 GATACCCTCCTTGTCCTGGATCTTTCCCTTGACGTTCTCGATAGTGTCGGAAGACTCCAC 13256 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | || ||||| || ||||| | ||| || ||||| | |||||| Sbjct 13257 CTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAGACTTGCATG 13305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946889755156