Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq39 111 1e-19 seq2 98.7 9e-16 seq58 87.8 2e-12 >seq39 Length=522589 Score = 111 bits (122), Expect = 1e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 ||||||||||| |||||||||||| | || || || | ||||| ||||||| ||||| Sbjct 29571 ACAATGCAAATCTTTGTAAAGACTCTTACTGGAAAGACTATCACGCTCGAAGTCGAGTCC 29630 Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || ||||| ||||| | ||| || ||| ||||| || || ||||| || ||| Sbjct 29631 TCGGACACAATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCTCCGGAC 29690 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| | || ||||||||||| || | || || | ||||| | |||| ||| Sbjct 29691 CAACAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACGCTCAGCGACTAC 29750 Query 25176 AATATTCAAAAAGA 25189 || || || || || Sbjct 29751 AACATCCAGAAGGA 29764 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| | ||||| ||||| | || || || | ||||| | ||||| || |||||| Sbjct 29802 ATGCAGGTCTTTGTCAAGACCCTCACTGGCAAGACGATCACTCTGGAAGTCGAATCGTCT 29861 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| ||||| || || || || || |||||| Sbjct 29862 GACACGATCGAAAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 29921 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| |||||||| || || | || || | ||| ||| || | || ||||| Sbjct 29922 CAGCGTCTTATCTTTGCCGGTAAGCAGCTGGAGGACGGTCGTACTCTGAGTGACTACAAC 29981 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || |||||| ||| | ||||| Sbjct 29982 ATCCAGAAGGAGAGCACGCTCCATCTCGTGCT 30013 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| | ||||| ||||| | || || || | ||||| ||||||| ||||| || Sbjct 30258 ATGCAGGTCTTTGTCAAGACCCTTACTGGCAAGACTATCACGCTCGAAGTTGAGTCCTCG 30317 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| ||||| || || || || || |||||| Sbjct 30318 GACACGATCGAAAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 30377 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| ||||||||||| || | || || | || ||| || | || ||||| Sbjct 30378 CAGCGTCTTATCTTTGCCGGCAAGCAGCTGGAGGACGGCCGTACTCTGAGTGACTACAAC 30437 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || |||||| || Sbjct 30438 ATCCAGAAGGAGAGCACGCTCCA 30460 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| | || || ||||| | || || || | ||||| ||||||| ||||| || Sbjct 30030 ATGCAGGTGTTCGTCAAGACCCTTACTGGCAAGACTATCACGCTCGAAGTCGAGTCCTCG 30089 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| ||||| || || ||||| || |||||| Sbjct 30090 GACACAATCGAAAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 30149 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||||||||| || | || || | ||||| | |||| ||||| Sbjct 30150 CAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACGCTCAGCGACTACAAC 30209 Query 25179 ATTCAAAAAGA 25189 || || || || Sbjct 30210 ATCCAGAAGGA 30220 >seq2 Length=94478 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||| | || || ||||| | || || || | ||||| | || |||||||| || Sbjct 13304 ATGCAAGTCTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTTGAGGTGGAGTCTTCC 13245 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||||||| | ||| ||| ||| ||||| || || || || || |||||| Sbjct 13244 GACACTATCGAGAACGTCAAGGGAAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 13185 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||||||||| || | || |||| ||||| | |||| ||||| Sbjct 13184 CAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTAGCGACTACAAC 13125 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||| || || | ||||| Sbjct 13124 ATCCAGAAGGAGAGCACTCTCCACCTTGTGCT 13093 >seq58 Length=446738 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || | ||||| | || || |||||| Sbjct 376040 ATGCAGATCTTCGTCAAGACACTCACGGGCAAGACGATCACTCTTGAGGTCGAGTCGAAC 376099 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | ||| | || | ||| ||||| || || ||||| || ||||| Sbjct 376100 GACACGATCGACATCGTCAAGTCTAAGATTCAG-GACAAGGAGGGTATTCCTCCGGACCA 376158 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||||| | ||||| |||||||| || | || || | ||||||| | |||| ||||| Sbjct 376159 ACAGCGGTTGATTTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTTAGCGACTACAA 376218 Query 25178 TATTCAAAAAGA 25189 || || || || Sbjct 376219 CATCCAGAAGGA 376230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327598629940