Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20cuniculi_20[genbank_20GCA_5F001264635.1_202015-08-11] 76 sequences; 7,459,907 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq58 122 2e-22 seq63 102 2e-16 >seq58 Length=446738 Score = 122 bits (134), Expect = 2e-22 Identities = 336/506 (66%), Gaps = 12/506 (2%) Strand=Plus/Plus Query 218506 ATCCCCGTCCCTGACTTCATCGACAAGGAGCTCAT--TCTTTTC--TCGCGGTATGATGT 218561 ||||| || | ||||| ||| |||||||||| || ||||||| | |||| | || | Sbjct 256788 ATCCCGATCTCGGACTTTATCAACAAGGAGCTGATCCTCTTTTCCATGGCGG-ACAATAT 256846 Query 218562 GGAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTT 218621 || || || || ||| ||||| || |||||||| ||||| ||| | |||| Sbjct 256847 C---CGCTCCATCCCGTCCGTCGTGGACGGACTCAAGCCTGGCCAGCGCAAGGTGATCTT 256903 Query 218622 TGCCGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGT 218681 || | |||||||| || ||| ||| || ||||| ||| | ||||| || Sbjct 256904 TGGCTGTTTCAAGCGTAATCTGCGCACAGAGATCAAGGTGCAGCAGCTCCAGGGTTACGT 256963 Query 218682 ATCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCC-ATTGTAGGCA 218740 || || | | ||||| || || || |||||| | || | ||||| ||| Sbjct 256964 GTCGGAGCACACGGCGTACCACCATGGCGAAACGAGTCTT-ACCATGACGATTGTCGGCC 257022 Query 218741 TGGCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCC-AACGGTCAGTTT 218799 | || ||||||| | ||||| ||||| | || |||| ||| || ||||||||||| Sbjct 257023 TCGCCCAGGACTTTTGCGGCAGCAACAATGTCAATCTGCT-CTCTCCGAACGGTCAGTTC 257081 Query 218800 GGTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTG 218859 ||| | || |||| || |||||| ||| ||| | || |||||||| | || Sbjct 257082 GGTACACGCAGCATGGGCGGCAAGGATGCTGCGAGCGCCCGTTACATCTTTACGGCGGTG 257141 Query 218860 TCGCCCGTGACGCGCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAG 218919 | | || ||| | | ||| ||| | |||| |||| ||| || || || || || Sbjct 257142 CCCAAGATCACACGCGCGCTTTTCCATCCGACCGACGATGCGCTGCTCAACTACCTCGAC 257201 Query 218920 GACGATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTA 218979 |||||||| || |||||||||||||| ||||||| | ||| ||||| | Sbjct 257202 GACGATGGCCAGAGCATCGAGCCCGAGTGGTACGTGCCTGTCGTGCCGCAGGTGCTCCTG 257261 Query 218980 AATGGTGCCAATGGTATCGGGACAGG 219005 || |||||| | || ||||| ||||| Sbjct 257262 AACGGTGCCGAGGGCATCGGCACAGG 257287 >seq63 Length=730213 Score = 102 bits (112), Expect = 2e-16 Identities = 140/192 (73%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 280168 TTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCG 280227 ||| | || |||| ||||| ||| |||| ||||| ||||| |||| || | || | Sbjct 515321 TTGCTATCCTTGGTCCCAACGGTTCGGGCAAGTCGACCCTTGTCAAGCTCATTGTCGGTG 515380 Query 280228 AGACCCAGGCCA-CTGAGGGGTCCGTT-TGGAAGCATCCCAACATGCGGATGGCTTACGT 280285 | || || ||| || |||| | | |||||||| || ||| || || | |||||| Sbjct 515381 ACACTGAGCCCAACTC--GGGTGAGATGTGGAAGCACCCTAACCTGGTCATTGGTTACGT 515438 Query 280286 CGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACAT 280345 ||| |||||||| ||||||||||| || | |||||||||| ||||||| | ||||||| Sbjct 515439 CGCCCAGCACGCGTTCCACCACATTGACCAGCACCTGGACAAGACTCCTCTCGAATACAT 515498 Query 280346 TCAGTGGCGCTA 280357 | ||||| || Sbjct 515499 GCTCTGGCGTTA 515510 Score = 96.9 bits (106), Expect = 7e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||| || || |||| | ||||||||||| || |||| ||||||||||| ||| Sbjct 514501 GGTGAGGACCTCTGCAACTGCCAGTTCTCGCTCGCCTACGGTGCCAAGATTCTGCTGAAC 514560 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || | ||| | ||||||||| |||| || ||||| ||||| || || || Sbjct 514561 ACTGCTACTCTCCGTCTTAAGCGTGGCCACCGCTACGGTCTTTGCGGTCGTAACGGTTCG 514620 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 |||||| || || ||||||||||| ||||| ||| | | ||| |||| ||| Sbjct 514621 GGTAAGTCTACCCTCATGCGCGCCATCCAGAACGGCCAGGTCG-AGGGCTTCCCCTCGCC 514679 Query 279525 T-CTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGAC 279563 | ||||| | || ||| || ||||||||| ||||| Sbjct 514680 TGACGAGGTCCGCACCTGGTACGTCGAGCACGACCTCGAC 514719 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGAT 279764 || ||||||||||||||||||||||| ||||| | || ||| | || | |||||||| Sbjct 514855 CTCTCGGGTGGTTGGAAGATGAAGCTCGCCCTTGCCCGTGCCGTGCTCTTCCGTGCCGAC 514914 Query 279765 GTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGT 279811 | || |||||||||||||| || ||||| | ||| || |||||| Sbjct 514915 ATTCTGCTGCTTGATGAGCCTACTAACCATCTTGACGTCATCAACGT 514961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835799143916